Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02606 and BPUM_1490

See Amino acid alignment / Visit BSNT_02606 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence dna-align/BSNT_02606___fabG.1.24716.seq
#    -bsequence dna-align/BPUM_1490___fabG1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02606___fabG-BPUM_1490___fabG1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02606___fabG-BPUM_1490___fabG1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02606___fabG
# 2: BPUM_1490___fabG1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 759
# Identity:     570/759 (75.1%)
# Similarity:   570/759 (75.1%)
# Gaps:          33/759 ( 4.3%)
# Score: 2086.0
# 
#
#=======================================

BSNT_02606___      1 ATGCTTAATGATAAAACGGCTATTGTCACTGGCGCATCCCGCGGAATCGG     50
                     |||||||...|||||||.||..||||.||.||.|||||.|||||.||.||
BPUM_1490___f      1 ATGCTTACAAATAAAACAGCCGTTGTAACAGGTGCATCACGCGGGATTGG     50

BSNT_02606___     51 CCGCTCAATCGCCCTTGATCTGGCAAAAAGCGGAGCAAATGTTGTCGTGA    100
                     |||.||.||.||..|.|||.|.|||||.|..||.||||||||||||||.|
BPUM_1490___f     51 CCGTTCTATTGCGATCGATTTAGCAAAGAATGGTGCAAATGTTGTCGTCA    100

BSNT_02606___    101 ACTACTCCGGCAATGAAGCGAAAGCAAATGAAGTGGTAGATGAAATCAAA    150
                     ||||.||.||.||.|||||.||||||||||||||.|||||||||||||||
BPUM_1490___f    101 ACTATTCTGGAAACGAAGCAAAAGCAAATGAAGTCGTAGATGAAATCAAA    150

BSNT_02606___    151 TCA-ATGGGCAGAAACGCAATTGCTGTAAAAGCGGATGTATCAAATCCCG    199
                     .|| .|||.||| .|.||..||||.||.|||||.|||||.||||||.|.|
BPUM_1490___f    151 GCACTTGGCCAG-CAGGCTTTTGCCGTGAAAGCTGATGTTTCAAATGCTG    199

BSNT_02606___    200 AAGATGTACAA---AACATGATAAAA------GAAACA-TTGTCTGTTTT    239
                     ||||.||||||   ..|||||.|.||      ||.||| |||.||     
BPUM_1490___f    200 AAGAAGTACAAGCGCTCATGAAACAAGCGGTTGATACATTTGGCT-----    244

BSNT_02606___    240 TTCTACGATTGACATTCTAGTTAATAATGCGGGAATTACAAGAGACAATC    289
                          |.||||||||.||.||.||||||||.||.|||||||.||||||.|
BPUM_1490___f    245 -----CAATTGACATCCTTGTCAATAATGCAGGGATTACAAAAGACAACC    289

BSNT_02606___    290 TCATCATGAGAATGAAAGAAGACGAATGGGATGACGTCATTAACATTAAC    339
                     |..|.|||||||||||||||.|.|||||||||||||||||||||||.|||
BPUM_1490___f    290 TGCTTATGAGAATGAAAGAAAATGAATGGGATGACGTCATTAACATAAAC    339

BSNT_02606___    340 CTGAAGGGTGTTTTCAACTGCACAAAAGCTGTTACAAGACAAATGATGAA    389
                     .|.||.|||||.||.|||||.||||||||.||.||..|.|||||||||||
BPUM_1490___f    340 TTAAAAGGTGTCTTTAACTGTACAAAAGCCGTGACTCGTCAAATGATGAA    389

BSNT_02606___    390 ACAGCGTTCA--GGCCGCATTATTAACGTATCGTCTATCGTCGGCGTCAG    437
                     ||||||  ||  ||..|.||.||.|||.|..|.||..|.||.|||||..|
BPUM_1490___f    390 ACAGCG--CAGTGGAAGAATCATCAACTTGGCTTCAGTGGTTGGCGTATG    437

BSNT_02606___    438 CGGAAACCCTGGACAGGCCAACTACGTGGCTGCAAAAGCCGGCGTCATCG    487
                     .||||||||||||||.||.|||||.||.||.||||||||.||.|||||||
BPUM_1490___f    438 TGGAAACCCTGGACAAGCAAACTATGTTGCAGCAAAAGCTGGTGTCATCG    487

BSNT_02606___    488 GTTTAACCAAGTCTTCTGCTAAAGAGCTCGCCAGCCGAAATATTACGGTA    537
                     |.|||||.||..|..|.||.||||||||.||.|.|||..|||||||.||.
BPUM_1490___f    488 GATTAACAAAAACAACAGCAAAAGAGCTGGCAACCCGTCATATTACAGTC    537

BSNT_02606___    538 AACGCAATAGCGCCAGGATTTATCTCAACTGATATGACAGATAAACTTGC    587
                     ||.|||.||||.|||||.|||||.|||||.|||||||||||.||.|||| 
BPUM_1490___f    538 AATGCAGTAGCACCAGGCTTTATTTCAACAGATATGACAGACAAGCTTG-    586

BSNT_02606___    588 AAAAG-ACGTTCAAGAC-GAAATGCTGAAACAAATTCCGCTCGCGCGCTT    635
                     |..|| |.||.| |||| ||||||||.||.||.||.|||||.||.|||||
BPUM_1490___f    587 ATGAGAATGTAC-AGACTGAAATGCTTAAGCAGATCCCGCTTGCACGCTT    635

BSNT_02606___    636 TGGTGAACCTAGCGATGTCAGCAGTGTTGTCACGTTCCTAGCTTCAGAGG    685
                     |||||.||||...|||.|.||||.||||||...|||..||||||||||.|
BPUM_1490___f    636 TGGTGCACCTGAAGATATTAGCAATGTTGTTGTGTTTTTAGCTTCAGAAG    685

BSNT_02606___    686 GAGCCCGTTATATGACAGGCCAAACGCTTCATATTGACGGCGGAATGGTG    735
                     ||||..|||||||.|||||||||||..|.||..|.||.|||||||||||.
BPUM_1490___f    686 GAGCAGGTTATATTACAGGCCAAACCATCCAAGTAGATGGCGGAATGGTC    735

BSNT_02606___    736 ATG---TAA    741
                     |||   |||
BPUM_1490___f    736 ATGTCCTAA    744


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