Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02601 and BPUM_1485
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_02601___sdaAA.1.24716.seq
# -bsequence dna-align/BPUM_1485___sdaAA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02601___sdaAA-BPUM_1485___sdaAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02601___sdaAA-BPUM_1485___sdaAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02601___sdaAA
# 2: BPUM_1485___sdaAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 915
# Identity: 675/915 (73.8%)
# Similarity: 675/915 (73.8%)
# Gaps: 24/915 ( 2.6%)
# Score: 2375.5
#
#
#=======================================
BSNT_02601___ 1 ATGTTTCGTAATGTAAAAGAATTAATTGAGATTACTAA-AGAAAAAC-AA 48
||||||...||.||.||||||.|..|..|| |||| ||||.||| .|
BPUM_1485___s 1 ATGTTTAAAAACGTCAAAGAACTCGTACAG----CTAACAGAAGAACGGA 46
BSNT_02601___ 49 ATA--TTGATCTCTGATGTGATGATAGCTCAAGAGATGGAAGTAACAGAA 96
||| |..||.||.||..|.|||||..|.|||||.||||||||.||||..
BPUM_1485___s 47 ATACCTCCATTTCAGAAATCATGATTACGCAAGAAATGGAAGTGACAGGG 96
BSNT_02601___ 97 AAAACAAAAGAGGACAT-TTTTCAGCAGATGGATCATAACCTGTCTGTTA 145
||..||...||.||.|| ||.|| .||.|||.|.|..|||||....||.|
BPUM_1485___s 97 AAGTCACGTGAAGATATATTCTC-CCAAATGTACCGCAACCTAGAAGTGA 145
BSNT_02601___ 146 TGGAAGCGGCGGTTCAGAAA--GGACTCGAGGGAGTTACGAGCCA--AAC 191
|||||..|||.|| ||||| ||.||..|.||.||.| |..|| |.|
BPUM_1485___s 146 TGGAACAGGCCGT--AGAAAACGGGCTAAAAGGTGTGA--AATCATTATC 191
BSNT_02601___ 192 GGGCTTAACAGGCGGAGATGCCGTTAAATTGCAGGCCTATATTCGATCAG 241
|||.|||||.|||||||||||.||.|||.|.||.||.||||||..|||||
BPUM_1485___s 192 GGGTTTAACGGGCGGAGATGCGGTCAAACTTCAAGCGTATATTGCATCAG 241
BSNT_02601___ 242 GAAAAAGCCTGTCTGGCCCGCTGATTTTAGATGCTGTATCGAAAGCCGTT 291
|.||||..||||||||.|....|||.|||||||||||....||.||.||.
BPUM_1485___s 242 GCAAAACACTGTCTGGTCATACGATATTAGATGCTGTCAGTAAGGCAGTG 291
BSNT_02601___ 292 GCAACAAATGAAGTAAATGCAGCAATGGGAACCATCTGTGCGACACCGAC 341
||||||||||||||.|||||.||||||||.||.||||||||.||.||.||
BPUM_1485___s 292 GCAACAAATGAAGTCAATGCCGCAATGGGGACGATCTGTGCAACGCCTAC 341
BSNT_02601___ 342 TGCAGGTTCTGCCGGTGTGGTGCCCGGTACGTTATTTGCTGTAAAAGAAA 391
.||||||||.||.|||||.|||||.||.||.||||||||.||||||.|||
BPUM_1485___s 342 AGCAGGTTCAGCAGGTGTCGTGCCAGGGACATTATTTGCAGTAAAACAAA 391
BSNT_02601___ 392 AGCTGAATCCAACAAGAGAACAAATGATCCGCTTTTTGTTTACGGCCGGG 441
...|.||.|||||||..|||||||||.||.|.||..|.||.||..|.||.
BPUM_1485___s 392 CATTAAAGCCAACAAAGGAACAAATGGTCAGATTCCTATTCACTTCTGGC 441
BSNT_02601___ 442 GCTTTCGGATTTGTCGTGGCTAATAACGCAAGCATTTCCGGCGCCGCCGG 491
||.||.||.|||||.|||||.|||||.||.|||||.||.||.||.||.||
BPUM_1485___s 442 GCATTTGGTTTTGTTGTGGCCAATAATGCGAGCATCTCTGGTGCAGCAGG 491
BSNT_02601___ 492 AGGATGTCAGGCAGAGGTTGGATCAGCTTCAGGCATGGCGGCTGCGGCCA 541
.||.||||||||.|||||.||.|||||.|||||.||||||||.||.||||
BPUM_1485___s 492 CGGCTGTCAGGCTGAGGTAGGTTCAGCCTCAGGGATGGCGGCAGCAGCCA 541
BSNT_02601___ 542 TTGTTGAAATGGCAGGAGGAACACCCGAACAAAGCGCGGAAGCCATGGCC 591
||||||||||||||||.||.||.||..|.|||...||.|||||.|||||.
BPUM_1485___s 542 TTGTTGAAATGGCAGGCGGTACGCCTCAGCAATCTGCTGAAGCAATGGCG 591
BSNT_02601___ 592 ATTACATTAAAAAATATGCTAGGCCTCGTGTGCGACCCTGTTGCAGGGCT 641
||||||.|.|||||||||||.||.||.||.||.|||||.||.||.||.||
BPUM_1485___s 592 ATTACACTGAAAAATATGCTTGGACTTGTTTGTGACCCAGTCGCTGGACT 641
BSNT_02601___ 642 TGTTGAGGTGCCTTGCGTGAAACGGAATGCGATGGGCGCGTCAAATGCAA 691
|||.|||||.||.|||||.|||||.||.||.|||||.||.||||||||.|
BPUM_1485___s 642 TGTCGAGGTACCGTGCGTAAAACGAAACGCAATGGGTGCATCAAATGCGA 691
BSNT_02601___ 692 TGATTGCCGCTGATATGGCATTGGCGGGCATTACAAGCCGTATTCCATGT 741
|||||||.||.|||||||||.|.||.|||||.|||||.||.|||||.|||
BPUM_1485___s 692 TGATTGCAGCAGATATGGCACTTGCCGGCATCACAAGTCGAATTCCGTGT 741
BSNT_02601___ 742 GATGAGGTTATCGATGCCATGTATAAAATAGGCCAAACGATGCCAACTGC 791
|||||.||.||.|||||.|||||||||||.||.|||||.||||||||.||
BPUM_1485___s 742 GATGAAGTCATTGATGCGATGTATAAAATCGGTCAAACCATGCCAACGGC 791
BSNT_02601___ 792 ACTTAGAGAAACAGGCCAGGGCGGTTTAGCGGCAACACCGACAGGAAGAG 841
||||.|.|||||||..||.|||||..|.||.||.||||||||||.|||||
BPUM_1485___s 792 ACTTCGTGAAACAGCACAAGGCGGACTTGCTGCGACACCGACAGCAAGAG 841
BSNT_02601___ 842 AATTAGAGAAAAAAATTTTCGGAGGAGCG--CT-AGGTTCACGTGAAACA 888
|..|.||.||.||.|||||||||||.|.| || | ||.|||||.|||
BPUM_1485___s 842 AGCTTGAAAAGAAGATTTTCGGAGGTGTGACCTCA---TCTCGTGATACA 888
BSNT_02601___ 889 ACATCAGCAAACTAG 903
..|.|.||||..||.
BPUM_1485___s 889 GAAACTGCAAGATAA 903
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