Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02597 and BPUM_1482

See Amino acid alignment / Visit BSNT_02597 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence dna-align/BSNT_02597___yloU.1.24716.seq
#    -bsequence dna-align/BPUM_1482.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02597___yloU-BPUM_1482.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02597___yloU-BPUM_1482.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02597___yloU
# 2: BPUM_1482
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity:     286/363 (78.8%)
# Similarity:   286/363 (78.8%)
# Gaps:           0/363 ( 0.0%)
# Score: 1122.0
# 
#
#=======================================

BSNT_02597___      1 GTGTCCATTGAATTAAGAACGAAGTACGGACAGATTGATATATCTAATGA     50
                     ||||||||||||.|.||||||||.||||||||.|||||||||||.|||||
BPUM_1482          1 GTGTCCATTGAACTTAGAACGAAATACGGACAAATTGATATATCAAATGA     50

BSNT_02597___     51 AGTCATCGCGATGGTTGCAGGAGGCGCGGCGGTTGACTGTTACGGCATTG    100
                     ||||||.||.|||||.|||||||||||.|||.|.||.||.||.||.||||
BPUM_1482         51 AGTCATTGCAATGGTGGCAGGAGGCGCTGCGATCGATTGCTATGGTATTG    100

BSNT_02597___    101 TCGGCATGGCCTCTAAAAACCAGATTAAAGACGGACTGACTGAAATCCTT    150
                     |.||.|||||.||.|||||.||.||.||.|||||..||||.||.||.||.
BPUM_1482        101 TTGGGATGGCGTCCAAAAATCAAATCAAGGACGGCTTGACGGATATTCTC    150

BSNT_02597___    151 CGGAAAGAGAATTTCAGCAGGGGTGTCCAAGTTCGCCAAGAAGGAGAACA    200
                     ||.||||||||.||||||.|||||||.|..||.||.|||.|||.|||.|.
BPUM_1482        151 CGCAAAGAGAACTTCAGCCGGGGTGTTCTTGTGCGTCAAAAAGAAGACCG    200

BSNT_02597___    201 GATACATATCGACATGTATATCATTGTCAGCTACGGCACGAAAATTTCTG    250
                     .||.|||||.||.|||||.|||||.|||||||||||.||.|||||.||.|
BPUM_1482        201 CATTCATATTGATATGTACATCATCGTCAGCTACGGTACAAAAATATCAG    250

BSNT_02597___    251 AAGTGGCACATAATGTCCAAACAAAAGTAAAGTACACAGTAAATCAAACC    300
                     ||||.|||||||||||.|||||.|||||.||.||.|||.|...|||.||.
BPUM_1482        251 AAGTCGCACATAATGTTCAAACGAAAGTCAAATATACAATTTCTCACACA    300

BSNT_02597___    301 ATCGGACTGGCAGTGGACTCTGTCAATATTTATGTCCAAGGCGTACGAGT    350
                     .|.||.||..|.||.||.||.|||||.||||||||.|||||.|||.||||
BPUM_1482        301 GTTGGGCTTTCTGTTGATTCGGTCAACATTTATGTACAAGGAGTAAGAGT    350

BSNT_02597___    351 GACGAACCCGTAG    363
                     .||||||||||||
BPUM_1482        351 TACGAACCCGTAG    363


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