Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02596 and BPUM_1481
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_02596___rpmB.1.24716.seq
# -bsequence dna-align/BPUM_1481___rpmB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02596___rpmB-BPUM_1481___rpmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02596___rpmB-BPUM_1481___rpmB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02596___rpmB
# 2: BPUM_1481___rpmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 167/189 (88.4%)
# Similarity: 167/189 (88.4%)
# Gaps: 0/189 ( 0.0%)
# Score: 747.0
#
#
#=======================================
BSNT_02596___ 1 ATGGCACGTAAATGCGTTATCACAGGTAAAAAAACAACAGCTGGGAATAA 50
||||||||||||||||||||.|||||.|.||||||||.|||||||||.||
BPUM_1481___r 1 ATGGCACGTAAATGCGTTATTACAGGCAGAAAAACAAAAGCTGGGAACAA 50
BSNT_02596___ 51 CCGTTCTCACGCAATGAACGCTTCTAAGCGCACTTGGGGCGCGAATCTTC 100
.||||||||||||||||||.||.|.||.||.||.|||||||||||.||||
BPUM_1481___r 51 TCGTTCTCACGCAATGAACTCTACAAAACGTACATGGGGCGCGAACCTTC 100
BSNT_02596___ 101 AAAAGGTTCGTATCCTTGTGAACGGAAAACCTAAAAAAGTATATGTATCT 150
||||.||||||||.||.|||.||||.||.|||||||.||||||||||||.
BPUM_1481___r 101 AAAAAGTTCGTATTCTAGTGGACGGTAAGCCTAAAAGAGTATATGTATCA 150
BSNT_02596___ 151 GCTCGAGCTTTGAAATCCGGTAAAGTTGAGCGTGTATAA 189
|||||||||||||||||.|||||||||||||||||||||
BPUM_1481___r 151 GCTCGAGCTTTGAAATCTGGTAAAGTTGAGCGTGTATAA 189
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