Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02591 and BPUM_1477
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_02591___yloQ.1.24716.seq
# -bsequence dna-align/BPUM_1477___yloQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02591___yloQ-BPUM_1477___yloQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02591___yloQ-BPUM_1477___yloQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02591___yloQ
# 2: BPUM_1477___yloQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 947
# Identity: 668/947 (70.5%)
# Similarity: 668/947 (70.5%)
# Gaps: 100/947 (10.6%)
# Score: 2260.5
#
#
#=======================================
BSNT_02591___ 1 ATGCCTGAGGGCAAAATTATTAAGGCGCTAAGCGGCTTTTACTATGTACT 50
|||||||||||||||||||||||.||..|||||||.||.||||||||.||
BPUM_1477___y 1 ATGCCTGAGGGCAAAATTATTAAAGCATTAAGCGGATTCTACTATGTGCT 50
BSNT_02591___ 51 GGATGAATC-------AGAGGATTCAGATAAAGTAATACAATGCAGAGGA 93
.||.||.|| ||.||| |||||..|.||.|||||||..
BPUM_1477___y 51 AGACGAGTCACAAGAAAGTGGA-------AAAGTGGTTCAGTGCAGAGCG 93
BSNT_02591___ 94 AGAGGCAT-TTTCAGAAAAAACAAAATTACCCCTCTTGTCGGTGATTATG 142
|||||||| |||| |||||||||||||.||.||||||||.||.|||||.|
BPUM_1477___y 94 AGAGGCATCTTTC-GAAAAAACAAAATCACACCTCTTGTTGGCGATTACG 142
BSNT_02591___ 143 TTGTGTATCAAGCTGAAAATGACAAAGAAGGATATTTAATGGAAATTAAA 192
|.|||||||||||.||.||.||.||||||||.||.|||.|.|||.|.|||
BPUM_1477___y 143 TCGTGTATCAAGCAGACAACGATAAAGAAGGCTACTTATTAGAAGTAAAA 192
BSNT_02591___ 193 GAAAGAACCAACGAGCTTATCAGGCCGCCAATTTGCAACGTTGATCAAGC 242
|||.|.||.|||||.|||.|..|.||.||.||..|.||||||||||||||
BPUM_1477___y 193 GAACGGACAAACGAACTTGTTCGTCCACCTATCAGTAACGTTGATCAAGC 242
BSNT_02591___ 243 GGTCCTTGTTTTCTCAGCGGTTCAG--CCTTCTTTCAGCACGGCATTGCT 290
|||.|||||||||||||||| ||| ||..|.||.|||| |||.|||
BPUM_1477___y 243 GGTACTTGTTTTCTCAGCGG--CAGAACCAACCTTTAGCA---CATCGCT 287
BSNT_02591___ 291 C---GACCGCTTCCTGGTTCTCGTTGAGGCCAATGATATTCAGCCGATTA 337
| |||.|.||..|.||.||.|||||.||||||.|||||.||||.||||
BPUM_1477___y 288 CTTAGACAGATTTTTAGTGCTTGTTGAAGCCAATCATATTGAGCCAATTA 337
BSNT_02591___ 338 TATGCATTACTAAAATGGATCTGATTGAAGATCAAGATACAGAA------ 381
|.||||||||||||||||| ||.|||||| ||.|.|| |||
BPUM_1477___y 338 TCTGCATTACTAAAATGGA-CTTATTGAA----AACAGAC-GAAGAGCGT 381
BSNT_02591___ 382 GATACGATACA-AGCCTATGCAGAAGACTATCGGAATATTGGTTATGACG 430
||.||||| || .||.||||||||.|||||||||.|.|||||.|||||.|
BPUM_1477___y 382 GAAACGAT-CATGGCATATGCAGACGACTATCGGCAAATTGGCTATGAGG 430
BSNT_02591___ 431 TATACCTTACCTCCTCT-------AAGGACCAAGACAG--TTTAACGGAC 471
||.| .|||.|| ||| |||| ||||.| ||.| |.|.
BPUM_1477___y 431 TACA-TTTAACT--TCTACGATTGAAGG----AGACGGCATTGA--GAAG 471
BSNT_02591___ 472 ATCATCCCGCATTTTCAGGATAAAACAACGGTATTTGCCGGTCAGTCCGG 521
.|.|..||.||.|||||..||||||..||||||||||||||||||||.||
BPUM_1477___y 472 CTGACTCCACACTTTCACAATAAAATCACGGTATTTGCCGGTCAGTCTGG 521
BSNT_02591___ 522 TGTTGGAAAATCCTCGCTTCTCAACGCGATCAGTCCGGA----GCTCGGA 567
|||.||.||.||.||.|||.|.||.|||||.|||||.|| ||.|
BPUM_1477___y 522 TGTAGGCAAGTCGTCCCTTTTAAATGCGATGAGTCCTGAATTGGCGC--- 568
BSNT_02591___ 568 TTGAGAACAAACGAGATTTCCGAGCATTTGGGCCGCGGGAAACACACAAC 617
|||.||||.|.||.||.||....|||.|.||.||.||.||.||.||.||
BPUM_1477___y 569 -TGAAAACAGATGATATCTCATCCCATCTCGGACGAGGAAAGCATACGAC 617
BSNT_02591___ 618 CCGCCACGTGGAGCTGATTC--ACACGTCCGGA---GGTTTGGTTGCAGA 662
..|.||.||.|||||.|||| ||| |.| ||..|..|||||||
BPUM_1477___y 618 AAGACATGTCGAGCTCATTCGAACA-----GCAAACGGGCTCATTGCAGA 662
BSNT_02591___ 663 TACGCCGGGATTCAGCTCGCTTGAATTTACAGACATTGAGGAAGAAGAGC 712
|||.|||||.||.||||||||.||||||||.|.|||.||.|.||||||.|
BPUM_1477___y 663 TACTCCGGGCTTTAGCTCGCTCGAATTTACTGGCATCGAAGCAGAAGATC 712
BSNT_02591___ 713 T-GGGCTATACCTTCCCAGATATCAGAGAAAAAAGCG----CTTCATGCA 757
| ||.||||| |||...||||||.|||||...|||.| | ||.|
BPUM_1477___y 713 TAGGTCTATA-CTTTTTAGATATTAGAGACCGAAGTGGAGAC----TGTA 757
BSNT_02591___ 758 AATTTAGAGGCTGTTTACATCTGAAAGAGCCGAAATGCGCGGTGAAACAA 807
|||||.||||||||.|.||..||||||||||....||.|||.|.|||.|.
BPUM_1477___y 758 AATTTCGAGGCTGTCTGCACGTGAAAGAGCCTGGCTGTGCGATAAAAGAT 807
BSNT_02591___ 808 GCTGTTGGAG-------ACGGGGAATTAAAGCAGTATCGCTATGACCATT 850
||.||| ||| | |||.|||| |||||||||||.|.||||
BPUM_1477___y 808 GCGGTT-GAGCATGATCA-----AATCAAAG-AGTATCGCTATCAGCATT 850
BSNT_02591___ 851 ATGTTGAATTTATGACGGAGATTAAAGACAGAAAGCCGAGGTATTAG 897
||.|.||.|||.|.||.||.||.||||||||||||||||||||.||.
BPUM_1477___y 851 ATCTAGAGTTTTTAACTGAAATCAAAGACAGAAAGCCGAGGTACTAA 897
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