Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02586 and BPUM_1472
See
Amino acid alignment /
Visit
BSNT_02586 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:08
# Commandline: needle
# -asequence dna-align/BSNT_02586___fmt.1.24716.seq
# -bsequence dna-align/BPUM_1472___fmt.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02586___fmt-BPUM_1472___fmt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02586___fmt-BPUM_1472___fmt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02586___fmt
# 2: BPUM_1472___fmt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 994
# Identity: 683/994 (68.7%)
# Similarity: 683/994 (68.7%)
# Gaps: 80/994 ( 8.0%)
# Score: 2185.0
#
#
#=======================================
BSNT_02586___ 1 ATGACGAGAATCGTATTTATGGGAACGCCGGATTTTTCAGTTCCTGTTTT 50
|||.|..|.||.||||||||||||||.||.|||||.|||||.|||||..|
BPUM_1472___f 1 ATGGCACGTATTGTATTTATGGGAACCCCTGATTTCTCAGTACCTGTGCT 50
BSNT_02586___ 51 AAGAACCCTGATTGAGGACGGATATGAAGTAGTGGGGGTCGTCACACAGC 100
...|||.||.||....||.|||||.|||||.||.|||||||||||.||.|
BPUM_1472___f 51 GCAAACACTCATAACAGAAGGATACGAAGTCGTCGGGGTCGTCACGCAAC 100
BSNT_02586___ 101 CGGACCGTCCGAAGGGCAGAAAAAAAGTCATGACACCTCCTCCGGTCAA- 149
|.||.||.|||||.|||||||||..|||..|.||.||.|||||.||.||
BPUM_1472___f 101 CAGATCGCCCGAAAGGCAGAAAACGAGTTCTCACGCCGCCTCCTGTGAAA 150
BSNT_02586___ 150 --GGAAG-----AGGCATTGCGTCACGGCATCCCGGTTCTT-CAGCCGGA 191
||||| |.|||| |||||.|||| |||| |||||.||
BPUM_1472___f 151 GTGGAAGCCTTAAAGCAT--------GGCATTCCGG-TCTTGCAGCCTGA 191
BSNT_02586___ 192 AAAAGT-CAGATTGACAGAAGAAATTGAGAAAGTGCTGGCATTAAAGCCT 240
|||.|| |...|||| .|||||||||||.|||||.||.|||.|||||||.
BPUM_1472___f 192 AAAGGTACGTCTTGA-TGAAGAAATTGATAAAGTCCTTGCACTAAAGCCG 240
BSNT_02586___ 241 GACCTGATTGTAACGGCGGCATTCGGACAAATTTTGCCTAAA-GAGCTTC 289
||..|.|||||.|||||||||||.|||||||||.|.||.||| || ||.|
BPUM_1472___f 241 GATTTAATTGTCACGGCGGCATTTGGACAAATTCTACCAAAACGA-CTGC 289
BSNT_02586___ 290 TCGACAGTCCAAAGTACGGCTGCATTAACGTTCACGCATCCCTTTTGCCG 339
|.||....||..|||..|||||.||.||.||.||.||.||.||..|.||.
BPUM_1472___f 290 TGGATGAACCTCAGTTTGGCTGTATCAATGTACATGCCTCACTGCTCCCA 339
BSNT_02586___ 340 GAACTGCGCGGCGGTGCTCCGATTCATTATTCCATTCTGCAGGGAAAGAA 389
|||||..|.||.||.||.|||||.||||||.|.||.||.||.||.||.||
BPUM_1472___f 340 GAACTAAGAGGGGGCGCGCCGATCCATTATGCGATCCTTCAAGGTAAAAA 389
BSNT_02586___ 390 GAAAACCGGGGTTACCATTATGTATATGGTAGAAAAATTGGATGCGGGCG 439
||||||.||.|||||.||||||||.|||||.|||..|.|.|||||.||.|
BPUM_1472___f 390 GAAAACAGGCGTTACGATTATGTACATGGTGGAACGACTTGATGCAGGGG 439
BSNT_02586___ 440 ATATGATCTCAAAAGTGGAAGTGGACATTGAAGAAACCGACAATGTCGGA 489
||||||||...|||||.||||||||.||.||.|||...|||||||||||.
BPUM_1472___f 440 ATATGATCAGTAAAGTAGAAGTGGAAATCGATGAATTAGACAATGTCGGT 489
BSNT_02586___ 490 ACACTGCACGATAAATTAAGCGCGGCTGGCGCGAAGCTATTGTCAGAAAC 539
|||.||||.||.||||||||.|..||.||.||....||||||..|||.||
BPUM_1472___f 490 ACATTGCATGACAAATTAAGTGTAGCAGGTGCTGCCCTATTGAAAGATAC 539
BSNT_02586___ 540 GGTTCCAAACGTTATTGCCGGCAGC-ATTTCACCTGAAAA----GCAGGA 584
.||.||.||.|||.|...||| |.| |||||.|| || |||..|
BPUM_1472___f 540 TGTGCCGAATGTTCTGAGCGG-ATCTATTTCGCC----AATTCCGCAAAA 584
BSNT_02586___ 585 TGAAGAGAAAGCGACATACGCGCCTAACATTAAAAGAGAGCAAGAGCTGC 634
||||||....||.||.|||||.|||||.||.||..|||||||.||...|.
BPUM_1472___f 585 TGAAGATGCCGCAACGTACGCACCTAATATAAAGCGAGAGCAGGAAAGGT 634
BSNT_02586___ 635 TCGACTGGTCCAGAACGGGCGAAGAGCTTTACAACCAGATCCGCGGCTTA 684
|.||||||.|.|..||.||.|||||||||||||||||..|.|||||||||
BPUM_1472___f 635 TAGACTGGACAAAGACCGGTGAAGAGCTTTACAACCAAGTTCGCGGCTTA 684
BSNT_02586___ 685 AATCCATGGCCTGTTGCCTATACGACGCTTAATGGACAAAAC-------- 726
|||||||||||.|||||||||| ||.||||| |||
BPUM_1472___f 685 AATCCATGGCCAGTTGCCTATA-----CTGAATGG----AACGGGGCTCA 725
BSNT_02586___ 727 -TTGAAAGTGTGGGAATCCAAAAAAA----CACCCGCA--CCAACCA-AA 768
.|.|||||.|||||| .|||||||| |||.||.| .|||..| ||
BPUM_1472___f 726 TCTAAAAGTATGGGAA-GCAAAAAAAGTTCCACTCGAAGTGCAAGAAGAA 774
BSNT_02586___ 769 GCTGAGCCAGGCACAGTCGTTGCGGTTGAAAAGGAAGG----GATTATCG 814
||| ||.|.|||..|||.|.||.||||.||||| | ||.
BPUM_1472___f 775 GCT------GGGAAAGTGATTGAGCTTCAAAAAGAAGGTCCAG----TCA 814
BSNT_02586___ 815 TTGCCACAGG---TAACGAGACGGCTCTGTTATTAACCGAACTCCAGCCG 861
|||..||.|| ||| |.|.||| ||..|||||||.|...|.|||||.
BPUM_1472___f 815 TTGGAACTGGGAATAA--ACAGGGC-CTTCTATTAACAGGTGTACAGCCA 861
BSNT_02586___ 862 GCAGGCAA-AAAACGAATGAAAGGCGAAGACTTTGTGCGAGGCGCTCATG 910
||.||.|| ||||.| ||||..|||||||||||..|..|||||||..||.
BPUM_1472___f 862 GCTGGTAAGAAAAAG-ATGAGCGGCGAAGACTTCCTAAGAGGCGCAAATA 910
BSNT_02586___ 911 TTGAAGTCGGTGATGTGTTAGGAGTAAACAATGAAAAAAACTAG 954
|.|||.|.||..|....|||||..|||..||||||.||||.||.
BPUM_1472___f 911 TCGAAATTGGACAGAAATTAGGGTTAATGAATGAAGAAAAGTAA 954
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.