Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02585 and BPUM_1471

See Amino acid alignment / Visit BSNT_02585 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence dna-align/BSNT_02585___def.1.24716.seq
#    -bsequence dna-align/BPUM_1471___def.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02585___def-BPUM_1471___def.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02585___def-BPUM_1471___def.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02585___def
# 2: BPUM_1471___def
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity:     347/514 (67.5%)
# Similarity:   347/514 (67.5%)
# Gaps:          62/514 (12.1%)
# Score: 1113.0
# 
#
#=======================================

BSNT_02585___      1 TTGGCAGTAAAA--AAGGTCGTCACACATCCTGCGGAGGTTTTGGAAACA     48
                     .|||||||||||  ||  |.||||.||||||.||.||.||..|.| ||||
BPUM_1471___d      1 GTGGCAGTAAAACCAA--TAGTCATACATCCGGCAGAAGTACTCG-AACA     47

BSNT_02585___     49 CCTGCGGAAA--CCGTGACTGT------TTTTGATAAAAAGCTAAAAAAA     90
                            |||  |.|.|.||||      .||.|||||||||||.|||||.
BPUM_1471___d     48 -------AAAGGCAGAGTCTGTCGATACGTTCGATAAAAAGCTTAAAAAG     90

BSNT_02585___     91 CTGCTTGATGATATGTACGACACCATGCTTGAAATGGATGGTGTCGGACT    140
                     ||.||||||||||||||.||.||.||||||||..|.||.||.||||||||
BPUM_1471___d     91 CTACTTGATGATATGTATGATACAATGCTTGAGCTAGACGGAGTCGGACT    140

BSNT_02585___    141 GGCAGCGCCGCAAATCGGCATTTTAAAAAGAGCGGCCGTTGTAGATATCG    190
                     .|||||.||.|||||.|||||||.|.|||||...||.|||||.|||||||
BPUM_1471___d    141 AGCAGCACCACAAATTGGCATTTCACAAAGAATTGCTGTTGTTGATATCG    190

BSNT_02585___    191 GGGATGACAGA----GGGAGAATTGATCTCGTTAATCCTGAAATTTTAGA    236
                     |.||    |||    ||.|||||||||.|.||.|||||.||..||.|.||
BPUM_1471___d    191 GTGA----AGAATCTGGCAGAATTGATTTAGTGAATCCCGAGGTTCTTGA    236

BSNT_02585___    237 AAGAAGCGGCGAG-CAAACCGGAATTGAAGGATGCTTGAGCTTTCC----    281
                     |..||..|| .|| |||||.|..||||||||.|||.||||||||||    
BPUM_1471___d    237 AGTAAAAGG-AAGTCAAACAGATATTGAAGGCTGCCTGAGCTTTCCATCT    285

BSNT_02585___    282 TGGCGTCTATGGTGATGT--------CAAACGTGCCGATTATGTCAAAGT    323
                     |    |.||.|||...||        |||.|        |||||.||.||
BPUM_1471___d    286 T----TATACGGTACAGTAGAAAGACCAAGC--------TATGTGAAGGT    323

BSNT_02585___    324 GCGTGCGTTTAACCGTCAG---GGAAAACCGTTCATTCTGGAAGCGCGAG    370
                     ....||.|||.|   |.||   ||.|||||.||.|...|.|||||...||
BPUM_1471___d    324 AAAAGCCTTTGA---TAAGAAAGGCAAACCATTTACAATAGAAGCAGAAG    370

BSNT_02585___    371 GCTTTTTAGCAAGAGCCGTGCAGCATGAAATGGACCACTTAGACGGTGTG    420
                     |.||||||||||||||..|...|||.|||||.||.||.||||||||..|.
BPUM_1471___d    371 GATTTTTAGCAAGAGCTTTATTGCACGAAATTGATCATTTAGACGGCATA    420

BSNT_02585___    421 CTGTTTACATCTAAAATAAGTAAATAC-TATACAGAAGATGAACTAGCGG    469
                     .|.|||||.||.|||||.|.|.|| || |||||||||.|.||||||||||
BPUM_1471___d    421 TTATTTACGTCGAAAATCATTCAA-ACTTATACAGAAAAAGAACTAGCGG    469

BSNT_02585___    470 ATATGGAAGGATGA    483
                     |.||||||||.|||
BPUM_1471___d    470 AAATGGAAGGGTGA    483


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