Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02580 and BPUM_1467
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:08
# Commandline: needle
# -asequence dna-align/BSNT_02580___gmk.1.24716.seq
# -bsequence dna-align/BPUM_1467___gmk.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02580___gmk-BPUM_1467___gmk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02580___gmk-BPUM_1467___gmk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02580___gmk
# 2: BPUM_1467___gmk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 622
# Identity: 480/622 (77.2%)
# Similarity: 480/622 (77.2%)
# Gaps: 14/622 ( 2.3%)
# Score: 1824.0
#
#
#=======================================
BSNT_02580___ 1 ATGAAAGAAAGAGGTTTATTAATCGTTCTCTCAGGTCCCTCAGGAGTTGG 50
||||||||||||||..|.||||||||||||||.||.||.||.||||||||
BPUM_1467___g 1 ATGAAAGAAAGAGGACTTTTAATCGTTCTCTCTGGACCTTCGGGAGTTGG 50
BSNT_02580___ 51 TAAAGGAACGGTTCGACAAGCGATCTTTTCGCAGGAAGACACAAAATTTG 100
.|||||||||||..||||.||.||.||.||.||||||||.||.|||||||
BPUM_1467___g 51 AAAAGGAACGGTCAGACAGGCCATTTTCTCCCAGGAAGATACGAAATTTG 100
BSNT_02580___ 101 AATATTCGATTTCAGTAACCACAAGAAGTCCAAGAGAGGGCGAAGTGAAC 150
||||.||.|||||.||.||.|||.|.|..||..|.||.||.|||...||.
BPUM_1467___g 101 AATACTCTATTTCTGTGACAACACGTAAACCGCGTGAAGGTGAAAGAAAT 150
BSNT_02580___ 151 GGAGTCGATTATTTTTTCAAAACAAGAGATGAATTCGAGCAAATGATTGC 200
||.|||||||||||.||.|||.|.||.||.|||||.||.||.|||||||.
BPUM_1467___g 151 GGTGTCGATTATTTCTTTAAATCCAGGGAAGAATTTGAACATATGATTGA 200
BSNT_02580___ 201 GGACAACAAGCTGCTTGAATGGGCAGAGTATGTCGGCAATTATTACGGCA 250
..||||.||.|||.|.||||||||||||||||||||.|||||.|||||||
BPUM_1467___g 201 AAACAAAAAACTGTTAGAATGGGCAGAGTATGTCGGGAATTACTACGGCA 250
BSNT_02580___ 251 CGCCAGTCGATTATGTTGAACAGACGCTTCAA--GATGGAAAAGACGTCT 298
||||.||.||.|||||.||||||| |.|.|| ||.||||||||.||.|
BPUM_1467___g 251 CGCCTGTTGACTATGTAGAACAGA--CATTAAGCGAAGGAAAAGATGTTT 298
BSNT_02580___ 299 TTTTAGAAATTGAAGTTCAAGGGGCTCTTCAAGTGAGAAATGCTTTCCCG 348
|..|.|||||.|||||.|||||.||.||||||||.|||.|.||.||.||.
BPUM_1467___g 299 TCCTTGAAATCGAAGTGCAAGGTGCACTTCAAGTAAGAGAAGCATTTCCA 348
BSNT_02580___ 349 GAAGGCCTGTTTATTTTCCTTGCGCCTCCAAGCCTTTCTGAACTGAAAAA 398
|||||.||.||||||||||||||.||.||.||.|||||.|||||..|.||
BPUM_1467___g 349 GAAGGTCTTTTTATTTTCCTTGCACCGCCTAGTCTTTCAGAACTTCAGAA 398
BSNT_02580___ 399 CAGAATCGTGACACGAGGCACAGAAACAGACGCTCTGATTGAAAATCGAA 448
|.|.|||.|.||.||.||.|||||..|.||.|..||.|||..||||||||
BPUM_1467___g 399 CCGCATCATTACGCGTGGTACAGAGTCTGAGGAGCTCATTCGAAATCGAA 448
BSNT_02580___ 449 TGAAAGCTGCAAAAGCTGAGATCGAAATGATGGATGCTTATGACTATGTC 498
||...||||||||||..|||||.|||||||||||||||||.|||||||||
BPUM_1467___g 449 TGGCTGCTGCAAAAGAAGAGATTGAAATGATGGATGCTTACGACTATGTC 498
BSNT_02580___ 499 GTTGAAAACGATAATGTCGAAACGGCTTGC----GATAAAATCAAAGCAA 544
||.|||||||||.||||||| |||||| ||.|.|||||||||.|
BPUM_1467___g 499 GTCGAAAACGATGATGTCGA----GCTTGCTTGTGAAAGAATCAAAGCGA 544
BSNT_02580___ 545 TCGTTCTTGCTGAACATTTGAAGC-GTGAACGCGTTGCACCAAGATATAA 593
|.||.|||||.|||||..|| .|| |.||..|.||.||||||||||||||
BPUM_1467___g 545 TTGTCCTTGCAGAACACCTG-CGCAGAGACAGAGTCGCACCAAGATATAA 593
BSNT_02580___ 594 GAAAATGCTGGAGGTTGAATAA 615
.||||||||||.|||.||||||
BPUM_1467___g 594 AAAAATGCTGGGGGTAGAATAA 615
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