Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02579 and BPUM_1466

See Amino acid alignment / Visit BSNT_02579 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence dna-align/BSNT_02579___ylzA.1.24716.seq
#    -bsequence dna-align/BPUM_1466.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02579___ylzA-BPUM_1466.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02579___ylzA-BPUM_1466.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02579___ylzA
# 2: BPUM_1466
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     225/270 (83.3%)
# Similarity:   225/270 (83.3%)
# Gaps:           0/270 ( 0.0%)
# Score: 945.0
# 
#
#=======================================

BSNT_02579___      1 ATGACGATTAAACTGATTAATATCGGATTTGGCAATATCATCTCCGCCAA     50
                     |||||.||.||..||||.||||||||||||||.||.|||||.||.||.||
BPUM_1466          1 ATGACCATAAAGTTGATCAATATCGGATTTGGAAACATCATTTCAGCGAA     50

BSNT_02579___     51 TCGGATGATTTCGATTGTCAGCCCGGAGTCTGCGCCAATCAAACGGATGA    100
                     |||||||||||||||.|||||.|||||.||.||.||.||.|||||.||||
BPUM_1466         51 TCGGATGATTTCGATCGTCAGTCCGGAATCAGCACCGATTAAACGAATGA    100

BSNT_02579___    101 TTCAGGATGCAAGAGACCGCGGAATGCTAATTGACGCTACATACGGACGA    150
                     |.||.||.||||||||.||.||.|||||.||.||.|||||.||||||.||
BPUM_1466        101 TACAAGACGCAAGAGATCGAGGCATGCTCATAGATGCTACTTACGGAAGA    150

BSNT_02579___    151 AGAACCCGTGCAGTTGTCGTCATGGATAGTGATCACATTATCTTATCTGC    200
                     |||||||||||.||||||.|.|||||.|||||.||..|.|||||||||||
BPUM_1466        151 AGAACCCGTGCTGTTGTCATTATGGACAGTGACCATGTCATCTTATCTGC    200

BSNT_02579___    201 CGTCCAGCCTGAGACAGTTGCACACAGACTTTCTGTTAAAGAAGAAATTA    250
                     |||.|||||||||||.||.||.||.|||||||||||.|||||||||||.|
BPUM_1466        201 CGTTCAGCCTGAGACTGTCGCGCAAAGACTTTCTGTAAAAGAAGAAATCA    250

BSNT_02579___    251 TGGATGAAGGGCAGGGGTAA    270
                     |.||||||||||||||||||
BPUM_1466        251 TAGATGAAGGGCAGGGGTAA    270


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