Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02575 and BPUM_1463
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:07
# Commandline: needle
# -asequence dna-align/BSNT_02575___yloA.1.24716.seq
# -bsequence dna-align/BPUM_1463.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02575___yloA-BPUM_1463.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02575___yloA-BPUM_1463.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02575___yloA
# 2: BPUM_1463
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1798
# Identity: 1238/1798 (68.9%)
# Similarity: 1238/1798 (68.9%)
# Gaps: 173/1798 ( 9.6%)
# Score: 4026.0
#
#
#=======================================
BSNT_02575___ 1 ATGTCGTTTGATGGCATGTTTACATACGGAATGACACACGAACTTAACGA 50
|||||.|||||.|||||.||||||||.||.||||||.|.|||.|..|.||
BPUM_1463 1 ATGTCATTTGACGGCATTTTTACATATGGTATGACAAATGAATTGCAAGA 50
BSNT_02575___ 51 GAAAATAATGGGCGGACGAATTACAAAAGTCCATCAGCCATATAAGCACG 100
||.|.|||..|||||..|||||.|||||.|||||||||||||||||||||
BPUM_1463 51 GACATTAACTGGCGGTAGAATTTCAAAAATCCATCAGCCATATAAGCACG 100
BSNT_02575___ 101 ATGTGATTTTCCACATCCGTGCCAAGGGAAAAAACCAAAAACTATTATTA 150
|..|||||||.||.|||||.||.||.|||||.||.||.||.||..|.|||
BPUM_1463 101 AGTTGATTTTTCATATCCGAGCAAACGGAAAGAATCATAAGCTCCTTTTA 150
BSNT_02575___ 151 TCGGCACATCCGAGCTATTCACGGGTGCATATCAC--GGCA-CAAGCTTA 197
||.||.||.||||||||..|..|.|||||..|||| .||| ||| ||
BPUM_1463 151 TCCGCTCACCCGAGCTACGCTAGAGTGCAGCTCACAGAGCAGCAA---TA 197
BSNT_02575___ 198 TGAAAATCCAAGCGAACCTCCAATGTTTTGCATGTTGCTGAGAAAGCATA 247
|||.|||||.||||||||||||||||||||.|||.|.||.|||||.|||.
BPUM_1463 198 TGACAATCCTAGCGAACCTCCAATGTTTTGTATGCTCCTTAGAAAACATC 247
BSNT_02575___ 248 TCGAAGGCGGATTCATTGAGAAAATT--GAACAAGCGGGCTTAGACCGCA 295
|.||.|||||||||||| |||..|| ||||||...||.||.|||||..
BPUM_1463 248 TTGAGGGCGGATTCATT--GAACGTTTCGAACAAATTGGATTTGACCGAG 295
BSNT_02575___ 296 TTATGATTTTTCATATCAAAAGCCGAAACGAAATTGGCGATGAA---ACC 342
|.||..|..|||||.|...||||||.||.|||||||||||.||| ||
BPUM_1463 296 TGATCGTACTTCATGTACGAAGCCGCAATGAAATTGGCGACGAACAGAC- 344
BSNT_02575___ 343 GTACGAAAGCTTTATGTAGAAATTATGGGCCGCCACAGCAATATCATT-T 391
.||||||||.||..|.|||||.|||||..|.||.||.|||.|.||| |
BPUM_1463 345 --TCGAAAGCTCTACATTGAAATCATGGGAAGACATAGTAATTTGATTCT 392
BSNT_02575___ 392 TGAC-----TG--ACGCAGCAGAAAATGTGATCATCGACGGACTTAAGCA 434
||.| || |||||||| |||.|||||.||.||.|||||
BPUM_1463 393 TGTCGAAGATGACACGCAGCA--------GATAATCGATGGCCTGAAGCA 434
BSNT_02575___ 435 -CTTATCACCGTCAATGAACAGCTACCGTACAGTACTGCCCGGCCAAGAT 483
||| ||.||.||..|||||||||||||.|||||.||.||.||.||.||.
BPUM_1463 435 TCTT-TCTCCATCTGTGAACAGCTACCGGACAGTGCTTCCTGGTCACGAA 483
BSNT_02575___ 484 TATAAGCTTCCGCCTGCCCAGGACAAAATATCGCCTCTTGAGGCGTCAG- 532
||....||.||||||||.|||.|.|||.||...||..||| |||
BPUM_1463 484 TACCTTCTGCCGCCTGCTCAGCAAAAATTAAATCCGTTTG------CAGT 527
BSNT_02575___ 533 -----AAGATGATATTTTGCGTCACCTCAGCTTTCAAGAAGGAAAGCTTG 577
|.|||||||||||....||..|..||||||||||||||| ||
BPUM_1463 528 AACGAAGGATGATATTTTAAAACATTTACGCTTTCAAGAAGGAA----TG 573
BSNT_02575___ 578 AT----AAACAAATTGTCGACCAC-TTTTCAGGGGTGTCTCCGCTTTTCG 622
|| |||||||||||||| .|| ||.||.|||||.|||||.||.||.|
BPUM_1463 574 ATCGCAAAACAAATTGTCGA-TACATTCTCTGGGGTTTCTCCTCTGTTTG 622
BSNT_02575___ 623 CCAAAGAAGCGGTTCACAGAGCAGGCCTTGCCAACAAAGTCACACTGCCA 672
|.||.|||||.||.|||||.||.||.||||..||..|.|..||..|.|||
BPUM_1463 623 CAAAGGAAGCTGTACACAGGGCCGGTCTTGTTAATCAGGAAACCATTCCA 672
BSNT_02575___ 673 AAAGCATTGCTGGCAC-TGTTTGCCGAAGTGAAAGAGCACCGTTTCATTC 721
||..||.||||.| || |||| || ||| |.||||
BPUM_1463 673 AATACACTGCTCG-ACATGTT--CC----------AGC------TTATTC 703
BSNT_02575___ 722 CCA-ACATTAC--GACT-------------GTAA--ACGGAAAGGAATAT 753
.|| .||||.| .||| |.|| |.||.|||||.|||
BPUM_1463 704 GCATGCATTCCTTTACTCCGCAGCTCACAAGAAAAGATGGGAAGGAGTAT 753
BSNT_02575___ 754 TTTTATCTGCTGGAGCTGAC-TCATCTAAAGGGCGAA------------- 789
||.|||.|..|.||||| || .|||.|..|.||.|||
BPUM_1463 754 TTCTATTTATTAGAGCT-ACAGCATATCGATGGTGAAATGAAAACATTCG 802
BSNT_02575___ 790 GCGCGCAGTTTTGAGTCATTAAGCGAACTGCTCGACCGTTTTTATTTCGG 839
||.| |.|.|||| |.|||||.|||||.|||||||||||
BPUM_1463 803 GCTC-----TCTCAGTC--------AGCTGCTTGACCGCTTTTATTTCGG 839
BSNT_02575___ 840 AAAAGCTGAACGAGACCGGGTCAAGCAACAGGC-TCAGGATCTTGAGCGT 888
.|||||||||.|||||.|.||.||.|||||.|| || .||.|||||.||.
BPUM_1463 840 CAAAGCTGAAAGAGACAGAGTGAAACAACAAGCGTC-TGACCTTGAACGG 888
BSNT_02575___ 889 TTTGTTGTGAACGAACGGAAGAAGAATGCCAACAAAATCAAAAAATTAGA 938
|||||.||.||.|||...|||||.||||..|||||..||||||||.|..|
BPUM_1463 889 TTTGTCGTAAATGAAAAAAAGAAAAATGAAAACAAGCTCAAAAAACTGAA 938
BSNT_02575___ 939 GAAAACCCTGGAGTATTCGGAAAACGCGAAGGAATTTCAGCTTTACGGAG 988
.|.||||||.|||.|.||..||||.||..|..|||.||||||.||.||.|
BPUM_1463 939 CAGAACCCTTGAGGAATCTCAAAATGCCCATAAATATCAGCTCTATGGCG 988
BSNT_02575___ 989 AGCTTTTAACCGCTAATTTATATATGC--TGAAAAAAGGTGATAAACAGG 1036
|..|..||||.||.|||| ||||||| |.||||||||.||||||.|||
BPUM_1463 989 AATTGCTAACAGCCAATT--TATATGCCATCAAAAAAGGGGATAAAGAGG 1036
BSNT_02575___ 1037 CTGA-GGTCATCAATTATTATGATGAAGAAAGCCCGA-CAATCACGATTC 1084
| || .||||||||||||||.||||||| |.|.|.|| .|||||||||.|
BPUM_1463 1037 C-GACTGTCATCAATTATTACGATGAAG-ATGGCGGAGAAATCACGATAC 1084
BSNT_02575___ 1085 CTTTAAACCCGAACAAAACGCCTTCTGAAAACGCACAGGCCTATTTCACG 1134
|..|.||..|.||||||||.|||||||||||.||.||.||.||||||||.
BPUM_1463 1085 CGCTCAAAACAAACAAAACCCCTTCTGAAAATGCGCAAGCATATTTCACA 1134
BSNT_02575___ 1135 AAGTATCAGAAAGCGAAAAATTCGGTCGCAGTTGTCGAGGAGCAAATCAG 1184
||.|||||.||.||.||||||.|.||.|.||..|||.|.||.|||||...
BPUM_1463 1135 AAATATCAAAAGGCAAAAAATGCAGTAGAAGCGGTCAATGAACAAATTGA 1184
BSNT_02575___ 1185 GCTGGCACAGGAAGAGATCGAATATTTTGATCAGCTGATTCAGCAGCTTT 1234
||.|.|.||.||||||||.|..|||||||||.||.|||||||||||||.|
BPUM_1463 1185 GCGGACGCATGAAGAGATTGCTTATTTTGATGAGTTGATTCAGCAGCTGT 1234
BSNT_02575___ 1235 CGTCCGCTTCTCCCCGGGATAT---CAGCGAAATCAGGGAAGAGCTTGTA 1281
|.||.|| |||.|||..|.|| .|| |||||.||.|||||||||||.
BPUM_1463 1235 CCTCTGC--CTCACCGAAAGATTTAGAG-GAAATGAGAGAAGAGCTTGTT 1281
BSNT_02575___ 1282 GAGGGCAAATATTTACGCCCTAAGCAGCAAA----AAGGCCAGAAAAAGC 1327
|||||.||||||||||||.|.||.|| ||| ||.||| ||||||.
BPUM_1463 1282 GAGGGGAAATATTTACGCGCCAAACA--AAAGCGTAACGCC--AAAAAGA 1327
BSNT_02575___ 1328 AAAAACCGCACAATCCGG------TGTTAGAAACATATGAATCCACCTC- 1370
|||||.|| .||| .|.|.|||.|.||||||| |..|||
BPUM_1463 1328 AAAAAACG------GCGGCGATTCAGCTCGAATCGTATGAAT-CGTCTCA 1370
BSNT_02575___ 1371 AGGGCTGACAATTTTAGTGGGTAAGAACAATCGTCAAAATGAATATTTAA 1420
||||.|..|.||.||.||.||.||.|||||....|||||.||||||||||
BPUM_1463 1371 AGGGATTCCGATCTTGGTCGGAAAAAACAACAAACAAAACGAATATTTAA 1420
BSNT_02575___ 1421 CGACAAGAGTGGCGGCCAGAGACGATATCTGGCTTCACACGAAGGACATT 1470
|.||||.||.|||.|||.|.||||||||.|||||.||||||||.||.|||
BPUM_1463 1421 CCACAAAAGCGGCTGCCCGTGACGATATTTGGCTGCACACGAAAGATATT 1470
BSNT_02575___ 1471 CCAGGCTCCCACGTTGTGATCAGAAGCAGCGAA--CCGGATGAGCAAACA 1518
||.||.||.|||||.||.|||.| .||.|.|| ||.|||||.||.||.
BPUM_1463 1471 CCTGGATCACACGTCGTCATCCG--TCATCAAACGCCTGATGAACAGACG 1518
BSNT_02575___ 1519 ATCATGGAAGCCGCGACAATTGCAGCTTATTTTTCAAAAGCTAAAGATTC 1568
.|..|.|||||.||...|||.||.||.||.||.||.||.||.|||||.||
BPUM_1463 1519 CTGCTTGAAGCGGCTCAAATCGCTGCCTACTTCTCGAAGGCAAAAGAGTC 1568
BSNT_02575___ 1569 AAGTTCAGTGCCTGTAGATTATACAAAAATCAGGCATGTCAAAAAACCAA 1618
.||.||.||.|||||.|||||.||.||||||.|||||||.||||||||||
BPUM_1463 1569 GAGCTCCGTACCTGTCGATTACACGAAAATCCGGCATGTGAAAAAACCAA 1618
BSNT_02575___ 1619 ACGGCGCGAAACCCGGTTTCGTCACCTATGA-CAGCCAGCATACCGTCTT 1667
|.||.||.||.||||||||.||.||.||||| || .|||||.||..|.||
BPUM_1463 1619 ATGGAGCCAAGCCCGGTTTTGTGACATATGATCA-ACAGCAAACATTGTT 1667
BSNT_02575___ 1668 TGTCACGCCTGATGCTGATACTGTCATCAAGCTC--AAAAAAAGCTGA 1713
||||||.|||||.|..|||...||..|.|||||| ||||.||
BPUM_1463 1668 TGTCACCCCTGACGAAGATGTGGTTCTAAAGCTCCGAAAATAA----- 1710
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