Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02568 and BPUM_1459
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence dna-align/BSNT_02568___cysC.1.24716.seq
# -bsequence dna-align/BPUM_1459___cysC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02568___cysC-BPUM_1459___cysC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02568___cysC-BPUM_1459___cysC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02568___cysC
# 2: BPUM_1459___cysC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 618
# Identity: 440/618 (71.2%)
# Similarity: 440/618 (71.2%)
# Gaps: 48/618 ( 7.8%)
# Score: 1523.0
#
#
#=======================================
BSNT_02568___ 1 GTGA-CAAATCGCG---ATATTGTATGGCATGAAGCCTCTATCACAAAAG 46
.||| ||| || ||||.||.||||||||..|.|||||.||||||.
BPUM_1459___c 1 ATGAGCAA----CGAACATATCGTGTGGCATGATTCATCTATTACAAAAA 46
BSNT_02568___ 47 AAGAGTATCAGCAAAAAAACAAGCATAAAAGCTCCATTCTCTGGCTGACA 96
|.||.|||||.||.||||||||.|||||||||..||||.|.|||||.|||
BPUM_1459___c 47 ATGAATATCAACAGAAAAACAATCATAAAAGCGGCATTATTTGGCTCACA 96
BSNT_02568___ 97 GGGTTAAGCGGCTCAGGCAAATCAACCATTGCCAACGCCGCTGCGAGAGA 146
||..||||.||.|||||.||||||||.|||||.||.||.||.||.|||||
BPUM_1459___c 97 GGTCTAAGTGGATCAGGTAAATCAACAATTGCAAATGCAGCGGCTAGAGA 146
BSNT_02568___ 147 ATTGTTTGAGCAAGGCTACCAAGTCATTGTGCTGGACGGGGATAATATCC 196
..|||||||.|||||.||.|||||.|..||.||.||.||.||||||.|.|
BPUM_1459___c 147 GCTGTTTGAACAAGGTTATCAAGTGACCGTTCTTGATGGTGATAATGTGC 196
BSNT_02568___ 197 GTCACGGCCTAAATAGGGATCTTGGTTTTTCTGATGAAGACCGAAAAGAA 246
|.||.||..|.||||..|||.|.||.|||||.|||||.|||.|||||||.
BPUM_1459___c 197 GGCATGGATTGAATAAAGATTTAGGGTTTTCAGATGATGACAGAAAAGAG 246
BSNT_02568___ 247 AACATCCGCCGGATCGGAGAGGTGGCGAAGCTTTTTGTTCAGCAGGGAAC 296
|||||||||||.||||||||.||||||||..|.||||||.||||.|||||
BPUM_1459___c 247 AACATCCGCCGCATCGGAGAAGTGGCGAAATTGTTTGTTGAGCAAGGAAC 296
BSNT_02568___ 297 CATTGTGATTACTGCTTTTATCTCTCCTTTCCGCGAGGACAG--GCA--- 341
.||.||.||.||.||||||||.|||||.||.|..||.|||.| |||
BPUM_1459___c 297 GATAGTTATCACGGCTTTTATTTCTCCATTTCAAGAAGACCGCCGCATTG 346
BSNT_02568___ 342 ----ACAGGTTCGCGAGCTT-GTGGAAGCGGGCGAATTTAATGAAGTCTA 386
|||| || ||||||||.||.||||||.|.|||||.|.
BPUM_1459___c 347 TCAGACAG----------TTAGTGGAAGCAGGGGAATTTCACGAAGTGTT 386
BSNT_02568___ 387 CATTAAATGCGACCTTGA---TATTTGTGAACAAAGAGATCCGAAAGGAC 433
..|.|||||.|| .|||| || ||.|||.||.|.||||| |||||..
BPUM_1459___c 387 TGTGAAATGTGA-TTTGAACGTA--TGCGAAGAACGTGATCC-AAAGGGG 432
BSNT_02568___ 434 TT-TACAAAAAAGCAAGAAACGGAGAGATTCCGTTCTTTACAGGAATTGA 482
|| ||.||||||||.|||||.||.||.|||||.||.||.||.||||||||
BPUM_1459___c 433 TTATATAAAAAAGCTAGAAATGGCGAAATTCCATTTTTCACCGGAATTGA 482
BSNT_02568___ 483 TTCACCTTATGAAGAACCGGAAGCTCCAGAGCTCGTTCTTGATTCAGGAC 532
||||||.||||||||.||.|.|||.||.|||||||||||.|||.||||
BPUM_1459___c 483 TTCACCATATGAAGAGCCAGCAGCACCTGAGCTCGTTCTAGATACAGG-- 530
BSNT_02568___ 533 AGCATGA------CCGTGAAGCGTGTAAAAATCAGCTGATCGAGTTTGTT 576
||| .|||||||.||..|||.|.|..||..|.||.|.|||.
BPUM_1459___c 531 ----TGAATTATCGCGTGAAGAGTCCAAACAACGTCTTGTTGATTATGTA 576
BSNT_02568___ 577 AAACAAAAATTGAGCTGA 594
|||.|||||..||..|.|
BPUM_1459___c 577 AAAGAAAAAGCGAAATAA 594
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