Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02564 and BPUM_1456
See
Amino acid alignment /
Visit
BSNT_02564 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence dna-align/BSNT_02564___cysH.1.24716.seq
# -bsequence dna-align/BPUM_1456___cysH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02564___cysH-BPUM_1456___cysH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02564___cysH-BPUM_1456___cysH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02564___cysH
# 2: BPUM_1456___cysH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 724
# Identity: 529/724 (73.1%)
# Similarity: 529/724 (73.1%)
# Gaps: 44/724 ( 6.1%)
# Score: 1838.5
#
#
#=======================================
BSNT_02564___ 1 ATGTTAACGTATGATAATTGGGAAGAACCAACGATTACATTTCCGGAAGA 50
||||||||.|||||.||||||.||||.||..|.||||||||||..|||||
BPUM_1456___c 1 ATGTTAACTTATGAAAATTGGCAAGAGCCGTCCATTACATTTCAAGAAGA 50
BSNT_02564___ 51 CGATCCTTATAAAGGAGCGCTGTCAGTTTTAAAATGGGCATACGGCCATT 100
.|||...||||||||.||..|.||.|||.|.||||||||||||||.||||
BPUM_1456___c 51 TGATTTGTATAAAGGGGCCTTATCTGTTCTGAAATGGGCATACGGTCATT 100
BSNT_02564___ 101 ACGGCAATCAACTTGTTTATGCCTGCAGTTTCGGAATTGAGGGAATCGTT 150
|.||..||||.||.||||||||.||.|||||.||.|||||.||.|||||.
BPUM_1456___c 101 ATGGTGATCAGCTCGTTTATGCATGTAGTTTTGGTATTGAAGGCATCGTC 150
BSNT_02564___ 151 CTGATTGACTTAATTTATAAAGTGAAAAAAGACGCAGAG-ATTGTGTTTC 199
||.|||||.||.|||...|||||.|||||.||.||| || |||||.|||.
BPUM_1456___c 151 CTTATTGATTTGATTGCGAAAGTAAAAAAGGATGCA-AGAATTGTCTTTT 199
BSNT_02564___ 200 TTGATACAGGACTTCATTTTAAAGAAACCTATGAAACAATTGA-ACGAGT 248
|.||||||||.||.||||||||.|||||.||.||.|||||||| .|| ||
BPUM_1456___c 200 TAGATACAGGTCTGCATTTTAAGGAAACGTACGACACAATTGATGCG-GT 248
BSNT_02564___ 249 ----GAAAGAGCGTTATCCGGGTCTTA-ATATCATCCTGAAAAAACCAGA 293
|||||| ||.|||||| ||| ||||..|.|||||||..||.||
BPUM_1456___c 249 AAAGGAAAGA----TACCCGGGT-TTAGATATTGTGCTGAAAACCCCTGA 293
BSNT_02564___ 294 CCTCACCCTTGAGGAACAAGCCGAAGAACATGGTGACAAACTGTGGGAAA 343
.||.||..|.|||||.|||..|||..|.||||||||..||||.|||.|||
BPUM_1456___c 294 GCTGACGGTGGAGGAGCAAAACGATCAGCATGGTGATCAACTATGGAAAA 343
BSNT_02564___ 344 GAGAGCCGAATCA---GTGCTGCTATCTTAGAAAGGTCGTTCCTTTAAGA 390
..||.|| ||| .||||||.||.|..|.||||||.|||||||...|
BPUM_1456___c 344 CGGATCC---TCAAAGCTGCTGCCATATGCGGAAGGTCATTCCTTTGCAA 390
BSNT_02564___ 391 GAGGCGCTTTCAGGACATCCAGCCTGGCTTTCCGGCCTGCGTCGTGATC- 439
||.|||.|.|||||..||||.||.||||||||.|||.|..|..|.||.|
BPUM_1456___c 391 GAAGCGTTATCAGGCTATCCTGCATGGCTTTCTGGCTTAAGAAGAGAGCA 440
BSNT_02564___ 440 -------AAGGGCCAAGCCGTGCCAATACGAATTTCTTAAACAAAGATGA 482
||| |.|||.|.| |||||.||.|||||.||.|||||
BPUM_1456___c 441 GTCACCTAAG---CGAGCAGGG-----ACGAACTTTTTAAATAAGGATGA 482
BSNT_02564___ 483 AAAATTCAAGTCAGTAAAAGTTTGCCCGCTTATCCATTGGACTTGGAAAG 532
|||||||||.|||||.|||||.||.|||||||||||.|||||.|||||.|
BPUM_1456___c 483 AAAATTCAAATCAGTGAAAGTATGTCCGCTTATCCACTGGACGTGGAAGG 532
BSNT_02564___ 533 ACATTTGGAGATACACATCCCG-GAATGAACTGGAC-TACAATCCGCTTC 580
||||.||||||||..||||..| ||| ||||| .|| ||.||||||||.|
BPUM_1456___c 533 ACATATGGAGATATGCATCTAGAGAA-GAACT-TACTTATAATCCGCTGC 580
BSNT_02564___ 581 ATGACCAAGGATATCCAAGTATTGGATGTGCGCCTTG--CACTGCTCCCG 628
||||.||.||||||||||||||.||.||||||||.|| |||.| ||.|
BPUM_1456___c 581 ATGATCAGGGATATCCAAGTATCGGCTGTGCGCCGTGTACACAG--CCAG 628
BSNT_02564___ 629 CTTTTACAGCAGAGGATTTGCGCTCAGGCAGATGGAATGGTATGGCGAAA 678
|.|||||.||..|||||.||||.||.|||||||||...||.|..||.||.
BPUM_1456___c 629 CATTTACTGCCCAGGATCTGCGGTCTGGCAGATGGTCAGGCACAGCTAAG 678
BSNT_02564___ 679 ACAGAATGCGGACTGCATGAATAA 702
||.||.||||||.|.|||||.|||
BPUM_1456___c 679 ACTGAGTGCGGATTACATGAGTAA 702
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.