Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02563 and BPUM_1455
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence dna-align/BSNT_02563___pyrE.1.24716.seq
# -bsequence dna-align/BPUM_1455___pyrE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02563___pyrE-BPUM_1455___pyrE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02563___pyrE-BPUM_1455___pyrE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02563___pyrE
# 2: BPUM_1455___pyrE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 671
# Identity: 455/671 (67.8%)
# Similarity: 455/671 (67.8%)
# Gaps: 70/671 (10.4%)
# Score: 1447.5
#
#
#=======================================
BSNT_02563___ 1 -TTGAAAC-AAATCATCGCAAAACATCTATTAGACATCCAAGCTGTAT-T 47
|..|||| ||| |||||.|||||.||||||.|.|||.||||.||.| .
BPUM_1455___p 1 ATGAAAACGAAA--ATCGCTAAACACCTATTACAAATCAAAGCGGTCTCA 48
BSNT_02563___ 48 TTTACGCCCGAACGAGCCGTTCACATGGGCAAGCGGCATTTTATCACCAA 97
||.|.|||.| ||||.|||||.||||||||||||||.||...||||||.|
BPUM_1455___p 49 TTGAAGCCAG-ACGAACCGTTTACATGGGCAAGCGGTATCAAATCACCGA 97
BSNT_02563___ 98 TCTACTGTGACAACCGCCTTACGCTATCTTTCCCAGAGGTCAGAAACGAT 147
||||.|||||||||||.|||||..|.||.|..|||||.||||||.||||.
BPUM_1455___p 98 TCTATTGTGACAACCGTCTTACCTTGTCCTATCCAGAAGTCAGACACGAC 147
BSNT_02563___ 148 GTCGCCTCAGGTATCAGCAAGCTTGTCAAAGAG------------CATTT 185
.|.|||..||| |.|.|||||| |||||
BPUM_1455___p 148 ATTGCCGAAGG------------TCTGAAAGAGTTGATTCTCACTCATTT 185
BSNT_02563___ 186 TCCTGAAGCTGAAATGATTGCGGGAACAGCAACTGCCGGTATTCCTCATG 235
|...|.|||.||..|||||||.||.||.|||||.||.||.||.||.||||
BPUM_1455___p 186 TGAGGGAGCAGAGGTGATTGCTGGTACTGCAACAGCAGGCATCCCGCATG 235
BSNT_02563___ 236 CTGCTCTTGCGGCTGACCGTTTGAATCTTCCGATGTGTTATGTGAGGAGC 285
|.||..|.|||||.||||||.|||||..|||||||||||||||.||.||.
BPUM_1455___p 236 CGGCATTAGCGGCAGACCGTCTGAATGCTCCGATGTGTTATGTCAGAAGT 285
BSNT_02563___ 286 AAGCCGAAGACACACGGCAAAGGCAATCAGATTGAGGGAGCTGT-GCAAG 334
|||||.||..||||.||.|||||.|||||.|||||.||.||.|| .|||
BPUM_1455___p 286 AAGCCAAAAGCACATGGAAAAGGGAATCAAATTGAAGGTGCCGTATCAA- 334
BSNT_02563___ 335 AAGGGCAAAAAACAGTCGTCATTGAAGACTTAATCTCCACAGGAGGCAGC 384
||||.|||||...|||||||.|.|||||..||||.||.|||||||||||.
BPUM_1455___p 335 AAGGCCAAAAGGTAGTCGTCGTAGAAGATCTAATTTCAACAGGAGGCAGT 384
BSNT_02563___ 385 GTGCTTGAAGCTTGT-GCAGCTTTACAAGCGGCCGGCTGTGAAGTGCTTG 433
|||||||||| |.|| ||.|||.|.||||..||.||||||||.||.||.|
BPUM_1455___p 385 GTGCTTGAAG-TGGTCGCTGCTCTTCAAGAAGCGGGCTGTGACGTACTAG 433
BSNT_02563___ 434 GTGTCGTCTCAATCTTTACGTATGGACTTCCTAAAGCGGAGGAAGCCTTC 483
|.||.|.|.|.|||||.||.||.||.||.||.|||||...||.|||.|||
BPUM_1455___p 434 GCGTTGCCGCGATCTTCACATACGGTCTGCCAAAAGCTACGGCAGCATTC 483
BSNT_02563___ 484 GCAAAGGCAGAAC-TGCCATA--CTACTCATTAACTGATTATGATACGCT 530
|||..|.|.||| |.||||| .||||| ||||.||.|||||.||.||
BPUM_1455___p 484 -CAAGAGAAAAACATTCCATATGTTACTC--TAACAGACTATGACACACT 530
BSNT_02563___ 531 CACAGAGGTCGCGCTTGAAAACGGAAATATTCATTCAA----------AT 570
.|||||.||.||.|||| |.|.|||| .||.||.| ||
BPUM_1455___p 531 GACAGACGTGGCACTTG--AGCTGAAA---GCAATCGAGCCTTCTGCTAT 575
BSNT_02563___ 571 GATCTAAA--AAAGCTGCAAACATGGAAACAAAATCCCGAGTCAAAAGAT 618
|| .|||| |||.| || ||||.||||.||||....||..||..|
BPUM_1455___p 576 GA-ATAAATTAAAAC-GC-----TGGAGACAAGATCCTTCCTCTGAATCT 618
BSNT_02563___ 619 TGGTTTAAAAAA------TAA 633
|||.|..||.|| |||
BPUM_1455___p 619 TGGATGGAAGAAACCGTCTAA 639
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