Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02558 and BPUM_1450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_02558___pyrAA.1.24716.seq
# -bsequence dna-align/BPUM_1450___pyrAA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02558___pyrAA-BPUM_1450___pyrAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02558___pyrAA-BPUM_1450___pyrAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02558___pyrAA
# 2: BPUM_1450___pyrAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1125
# Identity: 840/1125 (74.7%)
# Similarity: 840/1125 (74.7%)
# Gaps: 60/1125 ( 5.3%)
# Score: 3089.5
#
#
#=======================================
BSNT_02558___ 1 ATGAAGAGACGATTAGTACTGGAAAACGGAGCGGTATTCGAGGGAGAAGC 50
|||||||||||.|||||.||.|||||.|||.|.||||||||.|||..||.
BPUM_1450___p 1 ATGAAGAGACGCTTAGTGCTAGAAAATGGAACAGTATTCGAAGGAACAGG 50
BSNT_02558___ 51 CTTCGGAAGCTTAGAACACAACA-TGGGAGAAGTCGTTTTTAATACTGGG 99
|||.||.||||||||| .||.|| |.|||||||||||.||||||||.|||
BPUM_1450___p 51 CTTTGGCAGCTTAGAA-TCATCAGTCGGAGAAGTCGTCTTTAATACAGGG 99
BSNT_02558___ 100 ATGACAGGCTATCAGGAAATTTTATCTGATCCTTCTTACTGCGGACAAAT 149
||||||||.|||||.||||||||.||||||||.||.||||||||||||||
BPUM_1450___p 100 ATGACAGGTTATCAAGAAATTTTGTCTGATCCATCATACTGCGGACAAAT 149
BSNT_02558___ 150 CGTAACATTAACATACCCGCTTATCGGAAATTACGGCATTAACCGTGATG 199
.||.|||.|.||.||||||||||||||.||.|||||||||||.|||||||
BPUM_1450___p 150 TGTCACACTCACTTACCCGCTTATCGGCAACTACGGCATTAATCGTGATG 199
BSNT_02558___ 200 ATTTTGAATCCATTACCCCTTTTGTCAAAGGGCTGATCATCAAAGAATTA 249
||||||||||.||.||.||.|||||.||||||.||||..|.||.|||.|.
BPUM_1450___p 200 ATTTTGAATCGATCACACCGTTTGTAAAAGGGTTGATTGTGAAGGAACTT 249
BSNT_02558___ 250 TGTGAGCTGCCTTCCAACTGGCGTTCAGCATACAC-CTTAGACGAGTATT 298
|||||...|||.||.||||||||.||.||||||.| ||| ||.|||||||
BPUM_1450___p 250 TGTGAAAAGCCCTCAAACTGGCGCTCTGCATACTCGCTT-GATGAGTATT 298
BSNT_02558___ 299 TAAAAATGAAAAACATTCCCGGACTCCAG-GGGATTGATACAAGGAAGCT 347
||||||||||||||||.||.||.|| .|| ||.||.||||||.|.|||||
BPUM_1450___p 299 TAAAAATGAAAAACATCCCGGGTCT-TAGCGGAATAGATACACGCAAGCT 347
BSNT_02558___ 348 GACAAGAATGATCCGCACGGCAGGCGCGCTAAAAGGAACATTCGCTTCAT 397
||||.|.|||||.||.|..||||||.|..|||.||||.|.||.||...|.
BPUM_1450___p 348 GACACGCATGATTCGGAGTGCAGGCACATTAAGAGGAGCTTTTGCAGGAC 397
BSNT_02558___ 398 CTGATGAAGATATCGAAGCAGTGCTGAAAAGAC----TGAAC------GA 437
|.||||||.| ||| |.||||| |||.| .|
BPUM_1450___p 398 CGGATGAACA---------AGT----AGAAGACGTTGTGAGCCGCCTTCA 434
BSNT_02558___ 438 AACGGAAT-----TGCCAAGAAATCAAGTATCCCAAGTATCAGCAAAAAC 482
|||| || ||||||.|.||||||||...||||||||.|..||||.
BPUM_1450___p 435 AACG--ATGCAGCTGCCAACAGATCAAGTAAGTCAAGTATCTGTGAAAAA 482
BSNT_02558___ 483 AGCATATCCGAGCCCGGGAAGAGGCAAACGCATCGTCTTGGTTGACTTCG 532
.||.||.||.|||||.||||||||.|||.|.||.|||.|.||.||.|.||
BPUM_1450___p 483 TGCGTACCCAAGCCCAGGAAGAGGAAAAAGAATTGTCCTTGTCGATTACG 532
BSNT_02558___ 533 GCATGAAACACGGGATTCTAAGAGAGCTGAACAAACGGAAATGTGACGTC 582
|.|||||.|||||.|||.|..|||||||.||.||||||.|.|||||.|||
BPUM_1450___p 533 GTATGAAGCACGGTATTTTGCGAGAGCTTAATAAACGGGACTGTGATGTC 582
BSNT_02558___ 583 ATCGTTGTGCCTTACAACATTACAGCGGAAGAGGTGCTTCAGCTGAAACC 632
||.||.|||||.|||||.||.||.||.||.||.||.||.|||||.||.||
BPUM_1450___p 583 ATTGTGGTGCCGTACAATATCACGGCAGATGAAGTACTGCAGCTTAAGCC 632
BSNT_02558___ 633 GGACGGTATCATGCTTTCTAACGGACCTGGAGACCCGAAGGATGTGCCTG 682
.||.||.|||||||||||.|||||.|||||.||.||...||||||.||.|
BPUM_1450___p 633 AGATGGAATCATGCTTTCAAACGGCCCTGGGGATCCTGTGGATGTACCAG 682
BSNT_02558___ 683 AAGCGATTGAAATGATTAA--AGGTGTTCTTGGAAAAGTGCCATTATTCG 730
||||..|.||.||||||.| |..|| .|||||||.||.|||.|.||.|
BPUM_1450___p 683 AAGCAGTCGAGATGATTCAGCAATTG--ATTGGAAAGGTTCCACTCTTTG 730
BSNT_02558___ 731 GAATATGTCTCGGCCACCAATTATTCGCGCTGGCGTGCGGGGCGAATACT 780
|.||.||.||.||.||.|||||||||||||||||.|||||.||.|.||||
BPUM_1450___p 731 GTATTTGCCTAGGACATCAATTATTCGCGCTGGCATGCGGCGCAAGTACT 780
BSNT_02558___ 781 GAAAAAATGAAATTCGGCCACAGGGGCTCAAACCACCCGGTAAAAGAGCT 830
|||||||||||||||||.|||||.||||||||.||.||.||.|||||.||
BPUM_1450___p 781 GAAAAAATGAAATTCGGTCACAGAGGCTCAAATCATCCAGTGAAAGAACT 830
BSNT_02558___ 831 GGCTACAGGAAAAGTTGCCTTAACATCTCAAAACCATGGATATACAGTTT 880
.||.||.||.||.||..|.||.|||||||||||||||||.||.||||||
BPUM_1450___p 831 AGCAACTGGCAAGGTGACATTGACATCTCAAAACCATGGCTACACAGTT- 879
BSNT_02558___ 881 CGTCTATCAG-----TAAAACAGAA----CTGGAAGTGACGCATATCGCA 921
|| |.||..||.| ||.|||||.||.|||||||||
BPUM_1450___p 880 --------AGTGCCATTAACGAGGACGTGCTCGAAGTCACACATATCGCA 921
BSNT_02558___ 922 ATTAACGACGATACGATTGAAGGGCTGAAGCATAAAACATTGCCGGCATT 971
.|.||||||.||||.||||||||..|.||.||||||..|...||.|||||
BPUM_1450___p 922 CTAAACGACAATACAATTGAAGGTTTAAAACATAAAGAAGCACCAGCATT 971
BSNT_02558___ 972 TACGGTTCAATATCATCCCGAAGCCTCACCTGGTCCTGAGGATGCCAACC 1021
.||.||.||.||.|||||.|||||.|||||.|||||.||.|||||.|||.
BPUM_1450___p 972 CACTGTCCAGTACCATCCAGAAGCATCACCAGGTCCAGAAGATGCGAACT 1021
BSNT_02558___ 1022 ATCTATTTGA-CAGATTCATCGAAATGATCGAAACAACAGAGAAAGAAGG 1070
|..||||.|| ||| |||||.||.|||||..|.|||||.|||||||||||
BPUM_1450___p 1022 ACTTATTCGACCAG-TTCATGGATATGATTCATACAACTGAGAAAGAAGG 1070
BSNT_02558___ 1071 GGAAGCGGTATGCCAAAACGCGTAG 1095
|||||..||||||||||||||||||
BPUM_1450___p 1071 GGAAGAAGTATGCCAAAACGCGTAG 1095
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