Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02557 and BPUM_1449

See Amino acid alignment / Visit BSNT_02557 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:05
# Commandline: needle
#    -asequence dna-align/BSNT_02557___pyrC.1.24716.seq
#    -bsequence dna-align/BPUM_1449___pyrC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02557___pyrC-BPUM_1449___pyrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02557___pyrC-BPUM_1449___pyrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02557___pyrC
# 2: BPUM_1449___pyrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1332
# Identity:     997/1332 (74.8%)
# Similarity:   997/1332 (74.8%)
# Gaps:          90/1332 ( 6.8%)
# Score: 3580.0
# 
#
#=======================================

BSNT_02557___      1 ATGTCATATCTCATTAAAAACGGCTGGATACTAAACGAA--AATGGTGAA     48
                     |||||.||||||||||||||.||.|..|| ||.||| ||  |..||||||
BPUM_1449___p      1 ATGTCGTATCTCATTAAAAATGGTTTTAT-CTTAAC-AAGCACAGGTGAA     48

BSNT_02557___     49 AAA--ACAGAAGCGGATATCCGAGT-GACTGGAGAAACCA-TCACCGCAA     94
                     |||  .|||.|  ||||||..|.|| || .||||||...| ||| .||.|
BPUM_1449___p     49 AAAGTGCAGCA--GGATATTAGGGTAGA-AGGAGAAGTGATTCA-AGCGA     94

BSNT_02557___     95 TCGG-CAAGCTT-------GATGCAACGGATAATGAAACGGTAATTGATG    136
                     |.|| ||  |||       ||.|  |||||    |||..|||.|||||||
BPUM_1449___p     95 TTGGTCA--CTTAGAAAGAGAAG--ACGGA----GAAGAGGTCATTGATG    136

BSNT_02557___    137 CAAAAGG----TTTGCTCGTTTCACCTGGGTTTGTTGATCTCCACGTGCA    182
                     |.|||||    |||    ||||||||.||.||..|||||||.||.|||||
BPUM_1449___p    137 CTAAAGGGCTATTT----GTTTCACCAGGATTAATTGATCTGCATGTGCA    182

BSNT_02557___    183 TTTCAGAGAGCCGGGCGGAGAGAAAAAAGAAACTATTGAAACCGGGGCCA    232
                     |||.||||||||.||||||||||||||.|||||.||||||||.||..|.|
BPUM_1449___p    183 TTTAAGAGAGCCAGGCGGAGAGAAAAAGGAAACGATTGAAACAGGCTCTA    232

BSNT_02557___    233 AAGCGGCGGCACGCGGCGGCTATACTACAGTAGCAGCAATGCCGAATACG    282
                     |||||||.|||.|.|||||||||||.|||.|.|||||.||||||||||||
BPUM_1449___p    233 AAGCGGCAGCAAGAGGCGGCTATACAACAATTGCAGCGATGCCGAATACG    282

BSNT_02557___    283 CGGCCGGTTCCTGATACAAAGGAGCAGATGGAATGGGTGCA--AAACAGA    330
                     ||.||.|||||.||||||||.|||||.|||||||||.| ||  ||.| ||
BPUM_1449___p    283 CGCCCAGTTCCAGATACAAAAGAGCAAATGGAATGGCT-CATGAATC-GA    330

BSNT_02557___    331 ATTAAAGAAACATCATGCGTCAGAGTTCTTCCATATGCATCCATTACGAT    380
                     ||..||||.||.||.|..||||||||.||.|||||.||.|||||.||.|.
BPUM_1449___p    331 ATCGAAGAGACCTCTTCTGTCAGAGTGCTGCCATACGCCTCCATCACAAC    380

BSNT_02557___    381 CAGACAAATCGGCGATGAAATGACAAACTTTGAAGCGTTAAAAGAAGCCG    430
                     .||||||||.||.||.||.||||||.||||||.|||..||||||||||.|
BPUM_1449___p    381 AAGACAAATTGGGGAAGAGATGACAGACTTTGCAGCACTAAAAGAAGCAG    430

BSNT_02557___    431 GGGCATTTGCTTTTACAGATGACGGCGTTGGTATACAGACAGCAGGCATG    480
                     |.||.||.|||||||||||||||||.|||||.||.||.||||||||||||
BPUM_1449___p    431 GCGCCTTCGCTTTTACAGATGACGGGGTTGGCATCCAAACAGCAGGCATG    480

BSNT_02557___    481 ATGTATGAAGCGATGAAACGGGCAGCCGCAA---TTGA-CAAGGCGATTG    526
                     |||||.||||||||||||..||||   ||||   |||| ||| |||||||
BPUM_1449___p    481 ATGTACGAAGCGATGAAAAAGGCA---GCAAGTCTTGATCAA-GCGATTG    526

BSNT_02557___    527 TTGCACATTGCGAGGACAACTCCTTAATTTACGGAGGAAGCGTACATG-A    575
                     |.|||||.||.||.||.|||||..|.||||||||||||.||||.|||| |
BPUM_1449___p    527 TGGCACACTGTGAAGATAACTCGCTCATTTACGGAGGATGCGTCCATGAA    576

BSNT_02557___    576 GGGGACATTCTCCAAAGCGAACGGGCTAAACGGCATACCTTCTGTGTGTG    625
                     ||.|| |||.||.|||||.||.|||.|||||||.|||||.||..|.||||
BPUM_1449___p    577 GGAGA-ATTTTCAAAAGCAAATGGGTTAAACGGAATACCGTCCATTTGTG    625

BSNT_02557___    626 AATCGGTTCATATTGCCCGCGATGTGCTGCTGGCTGAGGCGGCAAACTGC    675
                     |||||||.||||||||..|.|||||.||..|.||.||.||.||.|||||.
BPUM_1449___p    626 AATCGGTGCATATTGCAAGAGATGTTCTTTTAGCAGAAGCAGCGAACTGT    675

BSNT_02557___    676 CATTACCATGTATGCCATATCAGTACAAAAGAATCTGTCAGGGTCGTACG    725
                     |||||.||||||||.|||||||||||.|||||||||||..|.|||||.||
BPUM_1449___p    676 CATTATCATGTATGTCATATCAGTACGAAAGAATCTGTGCGAGTCGTTCG    725

BSNT_02557___    726 CGATGCGAAAAAAGCGGGAATCAGAGTGACAGCAGAAGTGTCGCCGCATC    775
                     ||||||.||||||||.||.|||.|.|||||||||||.|||||.|||||||
BPUM_1449___p    726 CGATGCAAAAAAAGCAGGCATCCGCGTGACAGCAGAGGTGTCACCGCATC    775

BSNT_02557___    776 ATTTGCTGCTT-TGTGATGAGGACATCCCGGGGCTGGACACAAACTATAA    824
                     |..|||| ||| |||||||..||||||||.||.||.||.|||||||||||
BPUM_1449___p    776 ACCTGCT-CTTATGTGATGCCGACATCCCAGGTCTTGATACAAACTATAA    824

BSNT_02557___    825 AATGAATCCTCCGCTCCGCAGCGCAGAAGA------CAGAGCTGCTTTAA    868
                     |||||||||.|||||   |||.|.|.||||      | |||  ||..|||
BPUM_1449___p    825 AATGAATCCACCGCT---CAGAGGAAAAGAGGATCGC-GAG--GCACTAA    868

BSNT_02557___    869 TTGAAGGTCTTTTAGACGGAACAATTGATTTTATTGCAACAGACCATGCA    918
                     ||||.||.||.|||||.|||||.||||||||.||.|||||||||||||||
BPUM_1449___p    869 TTGAGGGGCTGTTAGATGGAACGATTGATTTCATCGCAACAGACCATGCA    918

BSNT_02557___    919 CCGCATACGGAAGAAGAGAAAAACACAGAA---ATGAAACTGGCGCCATT    965
                     ||||||||.||||||||.||.|||   |||   |||.|.|..||.||.||
BPUM_1449___p    919 CCGCATACAGAAGAAGAAAAGAAC---GAAACGATGCAGCGCGCACCTTT    965

BSNT_02557___    966 CGGAATTGTC-GGCTTAGAAACAGCATTCCCGCTTCTTTACACACACTTT   1014
                     .|||||.||| ||||| ||||||||.|||||||||||.|||||||..|||
BPUM_1449___p    966 TGGAATAGTCGGGCTT-GAAACAGCGTTCCCGCTTCTGTACACACGATTT   1014

BSNT_02557___   1015 GTCAAAAATGGCAGCTGGTCGCTGAAGCAGCTGATTGACTACATGACAAT   1064
                     |||||||..||....|||.|..|.||..|.||..||||.||.|||||.||
BPUM_1449___p   1015 GTCAAAACGGGTGAATGGACATTAAAAGAACTCGTTGATTATATGACGAT   1064

BSNT_02557___   1065 CAAGCCATGC-GAAGCGTTCGGTCTCCCATATGGAACATTACAAACGGGG   1113
                     ||||||| || ||.||.|||...||.||.|||||||...|..|||..|||
BPUM_1449___p   1065 CAAGCCA-GCAGAGGCCTTCTCCCTTCCTTATGGAAAGCTGGAAAAAGGG   1113

BSNT_02557___   1114 CAAGCTGCGGACATTACGTTAATCGATTTAGAAAAAGAAGCAGTTATAGA   1163
                     |||...||.||.||.||..|.||.||||||.|.||||||...|.|||.||
BPUM_1449___p   1114 CAAATCGCTGATATCACACTCATTGATTTAAACAAAGAAATGGCTATCGA   1163

BSNT_02557___   1164 CAAAGAGACATTTTTATCAAAAGGAAAAAATACACCATT---CA-----A   1205
                     .|||.|.|..||.||||||||||||.||||||||||.||   ||     |
BPUM_1449___p   1164 TAAAAAAAGCTTCTTATCAAAAGGACAAAATACACCGTTTGACAAATTGA   1213

BSNT_02557___   1206 CGGCATCAGCTGCACCGGCTGGCCGGTCGCTACAATTGCGGCAGGGAAGC   1255
                     |.|.||||        ||.|||||||||...|||.||||..|.|||||..
BPUM_1449___p   1214 CTGTATCA--------GGATGGCCGGTCATGACACTTGCATCTGGGAAAG   1255

BSNT_02557___   1256 TTGCTTATGAAGAGGGGAGACTTGTCAAATGA   1287
                     |.|..|||||||||||||||||.||.||||||
BPUM_1449___p   1256 TCGTGTATGAAGAGGGGAGACTAGTAAAATGA   1287


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