Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02555 and BPUM_1448
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_02555___pyrB.1.24716.seq
# -bsequence dna-align/BPUM_1448___pyrB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02555___pyrB-BPUM_1448___pyrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02555___pyrB-BPUM_1448___pyrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02555___pyrB
# 2: BPUM_1448___pyrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 968
# Identity: 652/968 (67.4%)
# Similarity: 652/968 (67.4%)
# Gaps: 97/968 (10.0%)
# Score: 2041.0
#
#
#=======================================
BSNT_02555___ 1 ATGAAGCATTTAACGACGATGAGTGAACTCAGC---ACTGAGGAAATCAA 47
|||||..||.||.||||.|||||| ||| ||| |||..|.
BPUM_1448___p 1 ATGAATGATCTATCGACAATGAGT------AGCTTAACT----AAAGAAG 40
BSNT_02555___ 48 AGATT-------TGCTTCAAAAAGCACAAGATCTCAAAAGCGGAAAAACA 90
||||| ||.||.||.|||||..||.||||||||..||.||...|
BPUM_1448___p 41 AGATTTTACAGCTGATTGAAGAAGCAACAGCTCTCAAAAAGGGTAAGCAA 90
BSNT_02555___ 91 GACAATCAGCTTA-CAGGAAAGTTTGCCGCAAACCTGTTTTTCGAACCGA 139
|| |.|..|.||| |||||.|.||||..||||||||.||.||.|||||.|
BPUM_1448___p 91 GA-ACTTGGTTTAGCAGGAGAATTTGTAGCAAACCTCTTCTTTGAACCAA 139
BSNT_02555___ 140 GCACGAGAACGCGGTTCAGCTTTGAGGTCGCAGAAAAAAAGCTGGGCATG 189
|.||.|||||.||.||.|||||.||.|||||.|||||.||.|||||.|||
BPUM_1448___p 140 GTACAAGAACACGATTTAGCTTCGAAGTCGCTGAAAAGAAACTGGGGATG 189
BSNT_02555___ 190 AATGTGCTCAACCTTGATGGAACAAGCACAAGCGTGCAAAAAGGCGAAAC 239
|||||.||.|.|.|.||||...|||||||...|||.||||||||||||||
BPUM_1448___p 190 AATGTACTGAGCTTAGATGCGGCAAGCACCTCCGTTCAAAAAGGCGAAAC 239
BSNT_02555___ 240 CTTATATGACACGATCCGG-----ACGCTCGAATCAATCGGTGTGGACGT 284
..||| |||||.||| |||||||||||.|||||.|||.|.|.
BPUM_1448___p 240 ACTAT-----ACGATACGGTAAAAACGCTCGAATCCATCGGCGTGAAAGC 284
BSNT_02555___ 285 CTGCGTCATCAGGCACAGTGAGGATGAGTATTATGAAGAGCTTGTCAGCC 334
.||.||.|||||..|||||...|||||.||.||..|.|||||..|..|..
BPUM_1448___p 285 TTGTGTGATCAGAGACAGTACAGATGAATACTACAACGAGCTGATTGGGA 334
BSNT_02555___ 335 AGGTGAATATTCCGATTCTGAATGCGGGAGACGGATGCGGCCAGCATCCA 384
|||||...|||||.||..|.|||||.|||||.||.|||||.|||||.||.
BPUM_1448___p 335 AGGTGGGGATTCCCATCATCAATGCTGGAGATGGCTGCGGGCAGCACCCG 384
BSNT_02555___ 385 ACACAATCACTGCTTGATTTAATGACGATTTATGAAGAGTTCAAT----A 430
||.||||||||.|||||..|||||||.||.||||||||||| | .
BPUM_1448___p 385 ACCCAATCACTACTTGACCTAATGACCATCTATGAAGAGTT---TGGCGG 431
BSNT_02555___ 431 CGTTCAAAGGGCTT-ACTGTCTCCATTCACGGCGACATCAAGCATAGCAG 479
|.|| .||||||| ||..|.||.|||||.||.|||||||||||.|||||
BPUM_1448___p 432 CTTT--GAGGGCTTAACGATTTCAATTCATGGAGACATCAAGCACAGCAG 479
BSNT_02555___ 480 AGTGGCAAGGTCAAATGCGGAAGTGTTGACAAGATTGGGTGC--CCGGGT 527
.|||||||||||.|||||.||||||.|..||||..||||.|| || ||
BPUM_1448___p 480 GGTGGCAAGGTCGAATGCTGAAGTGCTCTCAAGGCTGGGGGCGACC--GT 527
BSNT_02555___ 528 CCTATTTTCCGG-------CCCTTCGGAATGGCAGGATGAAGAAAATACA 570
|||.||.||.|| .||||| ||.|||||..|||||.|.
BPUM_1448___p 528 CCTTTTCTCAGGGCCTGCTTCCTTC-------CAAGATGAGCAAAATCCT 570
BSNT_02555___ 571 TTCGGTACGTATGTCTCAA-TGGATGAAGCAGTTGAGTCTTCCGATGTCG 619
..|||.||.|||||| ||| |.||.|||||..||.|....||.|||||.|
BPUM_1448___p 571 CACGGAACATATGTC-CAAGTAGACGAAGCCATTAAACAATCTGATGTAG 619
BSNT_02555___ 620 TCATGCTGCTGCGCATTCAAAATGAACGACATCAATCCGCTG------TC 663
|.|||||.||..|.||.||..|||||||.|| |.|.| |.
BPUM_1448___p 620 TGATGCTACTTAGAATACAGCATGAACGGCA------CACGGAAAAAATG 663
BSNT_02555___ 664 AGCCAGGAAGGCTATTTAAACAAATACGGCTTGACCGTAGAAC-GGGCTG 712
.||.|.||||..||.|||...|..||.||.||.||.||| ||| ||||..
BPUM_1448___p 664 GGCAATGAAGATTACTTATCGACTTATGGATTAACAGTA-AACAGGGCAA 712
BSNT_02555___ 713 AGCGTATGAAGCGGCATGCGATCATCATGCATCCTGCTCCGGTAAACAGA 762
||...|||||....|..||.||.||.||||||||.||.||.|||||.|||
BPUM_1448___p 713 AGAACATGAAAGAACGAGCCATTATTATGCATCCAGCACCAGTAAATAGA 762
BSNT_02555___ 763 GGGGTGGAGATTGATGACAGCT-TAGTAG----AAAGCGAAAAATCAAGA 807
||.||||||||.||||| ..|| |.|||| ||||| |.|||.||
BPUM_1448___p 763 GGTGTGGAGATAGATGA-TTCTCTCGTAGAATCAAAGC----AGTCACGA 807
BSNT_02555___ 808 ATCTTCAAGCAAATGCAAAATGGCGTATTTATCAGAATGGCAGTGATACA 857
||.||||||||||||.|||||||.||.|.|.||.||||||||||..||.|
BPUM_1448___p 808 ATTTTCAAGCAAATGGAAAATGGTGTTTATGTCCGAATGGCAGTATTAAA 857
BSNT_02555___ 858 GCGTGCCTTACAA---ACCAATGT-----GAAAAGAGGAGA-AG-CAGCG 897
..|.||.||.||| |.|||..| .||||| ||||| || |.|..
BPUM_1448___p 858 AAGAGCTTTTCAAAATAGCAAACTACATCAAAAAG-GGAGAGAGTCTGTC 906
BSNT_02555___ 898 TATGTCATATCTCATTAA 915
||||||.|||||||||||
BPUM_1448___p 907 TATGTCGTATCTCATTAA 924
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