Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02554 and BPUM_1447
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_02554___pyrP.1.24716.seq
# -bsequence dna-align/BPUM_1447___pyrP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02554___pyrP-BPUM_1447___pyrP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02554___pyrP-BPUM_1447___pyrP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02554___pyrP
# 2: BPUM_1447___pyrP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1443
# Identity: 982/1443 (68.1%)
# Similarity: 982/1443 (68.1%)
# Gaps: 162/1443 (11.2%)
# Score: 3504.5
#
#
#=======================================
BSNT_02554___ 1 ATGCCTCTTTGCGTAAAAAAGCAAAGAGGTTTTTTTATACAGTCATTGAG 50
BPUM_1447___p 0 -------------------------------------------------- 0
BSNT_02554___ 51 TCATCCTAAAATGAAAGTCAACAATCAGGGGGAAATCATCATGAGTAAGA 100
||||||.||.
BPUM_1447___p 1 ----------------------------------------ATGAGTCAGC 10
BSNT_02554___ 101 AAAAAGTAAATTTAGGGGTCAGGGATGTCCCGACACCTTTCTCTTGGGTT 150
||||||..||||||||..|..|.|||.|.||.|.|||.|||.|.|||.|.
BPUM_1447___p 11 AAAAAGCCAATTTAGGCATTCGAGATATTCCAAAACCGTTCACATGGCTG 60
BSNT_02554___ 151 TCATTCAGCCTTCAGCATTTGTTTGCCATGTTTGGCTCAACCATTTTGGT 200
||..|.|||||||||||||||||||||||||||||..|.||||||.|.||
BPUM_1447___p 61 TCGCTTAGCCTTCAGCATTTGTTTGCCATGTTTGGTGCGACCATTCTAGT 110
BSNT_02554___ 201 TCCGAAGCTCGTCGGAATGAGTCCTGCTGTGGCGTTGGTGACAAGCGGCA 250
.||.||..||.|||..||||||||.||.||.|||.|..|..|||||||..
BPUM_1447___p 111 ACCAAAAATCATCGATATGAGTCCAGCCGTTGCGCTCATCTCAAGCGGTG 160
BSNT_02554___ 251 TCGGAACACTGGCGTACCTTCTTATTACGAAAGGGCAAATTCCGGCGTAT 300
|.|||||..|.|..|||.|..|.||.||.|.|||.|||||||||||||||
BPUM_1447___p 161 TTGGAACGATTGTTTACTTAATCATCACAAGAGGCCAAATTCCGGCGTAT 210
BSNT_02554___ 301 CTCGGTTCATCCTTCGCCTTTATTTCTCCGATCATTCTG---GTAAAAGC 347
||.|||||.|||||.||||||||..|.|| |||.||| ||.|||||
BPUM_1447___p 211 CTTGGTTCGTCCTTTGCCTTTATCGCCCC---CATACTGAATGTCAAAGC 257
BSNT_02554___ 348 GACCGGCGGGCCAGGAGCGGCAATGGTTGGAGCGTTTCTTGCAGGGCTGG 397
.||.|||||.||.|||||.|||||||||||.||.|| ||.|||.||
BPUM_1447___p 258 AACAGGCGGCCCTGGAGCCGCAATGGTTGGTGCCTT-----CATGGCGGG 302
BSNT_02554___ 398 TGTACGGG------CTGATTGCCTTATTGATCAGGCAGCTTGGAACAGGA 441
||| ||.| ||.|||||..||||.||.|....||||||.|||||.
BPUM_1447___p 303 TGT-CGCGTATGCACTCATTGCACTATTTATAAAATGGCTTGGCACAGGC 351
BSNT_02554___ 442 TGGCTGATCAAGATTCTCCCGCCTGTAGTCGTAGGGCCTGTTATTATCGT 491
||||||||.|||.||||.|||||.||.|||||||||||.||.|||||.||
BPUM_1447___p 352 TGGCTGATGAAGCTTCTGCCGCCGGTCGTCGTAGGGCCGGTCATTATGGT 401
BSNT_02554___ 492 CATCGGGCTGGGACTGGCAAGCACTGCGGTAAACATGGCGATGTATGCTG 541
||||||.||.|||||.||..|.||.||.||.||||||||||||||||.||
BPUM_1447___p 402 CATCGGACTTGGACTCGCTGGAACAGCTGTTAACATGGCGATGTATGTTG 451
BSNT_02554___ 542 ATCCAAACGCGAGTGAGTTGGTCTACAGCTTAAAGCACTTTAGTGTCGCA 591
|||||||.||.|.||||.|.||.||||||.|.||||||||.|..|||||.
BPUM_1447___p 452 ATCCAAATGCCACTGAGCTTGTTTACAGCCTGAAGCACTTAACGGTCGCC 501
BSNT_02554___ 592 GGAGTTACGCTGGCAATTACGATTATTTGTGCGATTTTCTTACGAGGATT 641
||..|.||.|||||..|.||||||||..|...|||||||.||.||||.||
BPUM_1447___p 502 GGCTTCACACTGGCTGTCACGATTATCAGCATGATTTTCCTAAGAGGCTT 551
BSNT_02554___ 642 TTTAAGCCTGATTCCGGTTCTGATCGGAATCATCGGCGGATACTTGTTCG 691
..|||||.|||||||.||..|.||.||.||.|||.||||.||..|.||.|
BPUM_1447___p 552 CCTAAGCTTGATTCCAGTATTAATTGGCATAATCAGCGGCTATCTCTTTG 601
BSNT_02554___ 692 CCCTTACTCAAGGGATTGTCAACTTCCAGCCGGTGCTTGACGCGAAATGG 741
||.|.||.|||||.|||||.||.||.||||||||..||||.||.||||||
BPUM_1447___p 602 CCTTAACACAAGGCATTGTGAATTTTCAGCCGGTCATTGATGCAAAATGG 651
BSNT_02554___ 742 TTTGCAGTGCCTGAATTTATCATTCCGTTCAAAGATTATTCACCGTCAGT 791
|||||.||.||.||.||..||.|.||.||....||||||.||||..|.||
BPUM_1447___p 652 TTTGCTGTACCAGACTTCGTCGTACCATTTGTCGATTATACACCTGCTGT 701
BSNT_02554___ 792 TACACTCGGCA-TCGCAGCCGCAATGGTTCCTGTCGCATTTGTCACAATG 840
.|||.|..||| ||.|| |.|..|||||.||.||.||.|||||.||||||
BPUM_1447___p 702 GACATTAAGCATTCTCA-CTGTGATGGTGCCGGTTGCCTTTGTGACAATG 750
BSNT_02554___ 841 TCAGAGCATATCGGCCACCAAATGGTGCTGAGCAAGGTTGTCGGACAAGA 890
||.||||||||.|||||||||.|||||.|.||.||.|||||.||.|||||
BPUM_1447___p 751 TCTGAGCATATTGGCCACCAAGTGGTGTTAAGTAAAGTTGTAGGGCAAGA 800
BSNT_02554___ 891 TTTCATTAAAAAGCCAGGTCTTCATCGCTCTATTATGGGTGACAGTGTGG 940
||||||||||||.||.||||||||||||||.|||.|.||.|||||||..|
BPUM_1447___p 801 TTTCATTAAAAAACCTGGTCTTCATCGCTCCATTTTAGGAGACAGTGCAG 850
BSNT_02554___ 941 CGACAATCCTCGCTTCCCTGATCGGCGGTCCGCCGACAACGACATACGGA 990
||||||||.|||||||.||.||.|||||.||.||||||||.||.||.|||
BPUM_1447___p 851 CGACAATCTTCGCTTCACTCATTGGCGGACCACCGACAACAACGTATGGA 900
BSNT_02554___ 991 GAAAACATTGGCGTACTGGCCATCACAAGAGTATTCAGCGTCTTTGTCAT 1040
||.|||||.|||||.||.|||||.||||||||.|||||..||||.|||||
BPUM_1447___p 901 GAGAACATCGGCGTCCTTGCCATTACAAGAGTGTTCAGTATCTTCGTCAT 950
BSNT_02554___ 1041 CGGAGGAGCGGCAGTGATTGCTTGTTGCTTCGGCTTTATAGGCAAAATTT 1090
|||.|||||.|||||..||||....||||||||||||.|.||.|||||.|
BPUM_1447___p 951 CGGCGGAGCAGCAGTCTTTGCCATCTGCTTCGGCTTTGTCGGAAAAATCT 1000
BSNT_02554___ 1091 CAGCGCTGATCAGTTCAGTGCCATCAGCGGTCATGGGAGGCGTCTCCTTC 1140
||||..|.||||||.|||||||.||.|||||||||||||||||.||.|||
BPUM_1447___p 1001 CAGCATTAATCAGTACAGTGCCGTCCGCGGTCATGGGAGGCGTTTCGTTC 1050
BSNT_02554___ 1141 CTGCTGTTCGGAATCATTGCTTCAAGCGGCCTGAGAATGCTGATTGACAA 1190
|||||.||.||.||||||||.||||||||.||||||||.||||||||..|
BPUM_1447___p 1051 CTGCTCTTTGGGATCATTGCCTCAAGCGGTCTGAGAATTCTGATTGATCA 1100
BSNT_02554___ 1191 CAAAATTGATTATGAA-AACAACAGAAACCTCATTATTACATCAGTTATC 1239
.|||.|..|||.|||| ||.||| |.||.|||||||||.|||||||.|||
BPUM_1447___p 1101 TAAAGTGAATTTTGAAGAAAAAC-GTAATCTCATTATTGCATCAGTCATC 1149
BSNT_02554___ 1240 CTTGTCATCGGTGTAGGAGGAGCTTTTATCCAAGTGTCTCAAGGCGGATT 1289
.|.||.|||||..|.||.||.||.||.||..|.|||...||| ||
BPUM_1447___p 1150 TTAGTGATCGGAATTGGCGGGGCATTCATTGAGGTGAAACAA-----AT- 1193
BSNT_02554___ 1290 CCAA-------GTGTCAGGAATGGCGCTTGCCGCAATTGTCGGTGTCATC 1332
||| .|.||.||||||||.|||||.||.||....||||||.|.
BPUM_1447___p 1194 -CAACCTTACGCTATCTGGAATGGCACTTGCTGCCATCACGGGTGTCTTG 1242
BSNT_02554___ 1333 TTAAACCTGATTCTTCCGCAGGCGAA---GGAAGAGCAGAC-AGACACAT 1378
|||||||||||.||.||.|||.|.|| |||.|| .||| ||.||.|
BPUM_1447___p 1243 TTAAACCTGATCCTGCCTCAGCCAAAAGCGGATGA--TGACGAGTCAAA- 1289
BSNT_02554___ 1379 CTGAACATC--ATA----------TCTAA-------------- 1395
||| ||| ||| |.|||
BPUM_1447___p 1290 -TGA--ATCGAATACAGAAAACCTTTTAAAAGAAGTCCAGTGA 1329
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