Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02537 and BPUM_1435

See Amino acid alignment / Visit BSNT_02537 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence dna-align/BSNT_02537___ylmC.1.24716.seq
#    -bsequence dna-align/BPUM_1435___ylmC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02537___ylmC-BPUM_1435___ylmC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02537___ylmC-BPUM_1435___ylmC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02537___ylmC
# 2: BPUM_1435___ylmC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     188/247 (76.1%)
# Similarity:   188/247 (76.1%)
# Gaps:          11/247 ( 4.5%)
# Score: 714.0
# 
#
#=======================================

BSNT_02537___      1 ATGATCAGCATTTCAGAATTTCAGGTAAAGGATGTCGTCAATGTCTCAAA     50
                     ||||||||.|||||.|||||.||..|.||||||||.|||.||||.||||.
BPUM_1435___y      1 ATGATCAGTATTTCTGAATTCCAAATCAAGGATGTTGTCGATGTGTCAAG     50

BSNT_02537___     51 CGGAAAAAAGCTGGGGAGTATTGGTGATATTGATATCAATGTGACCACTG    100
                     |||||||||.||.||.|..|||||.||.|||||||||||||||||.|..|
BPUM_1435___y     51 CGGAAAAAAACTAGGCACCATTGGGGACATTGATATCAATGTGACGAGCG    100

BSNT_02537___    101 GAAAAATTCAGGCGATCATACTCGGAGGAAATGGGAAAGTTCTCGGATTT    150
                     |.|||||.||.||.|||||..||||.||||..||.|||.|..|.||||||
BPUM_1435___y    101 GTAAAATACAAGCAATCATTATCGGCGGAACAGGTAAAATGATGGGATTT    150

BSNT_02537___    151 TTTGGAAAAGAAGAGGAATTGGTCATTCCATGGCGAAATATAGTAAAAAT    200
                     ||.|||||||||||||||.||.|..|.||.||||||||||||||||||||
BPUM_1435___y    151 TTCGGAAAAGAAGAGGAAATGATTGTGCCGTGGCGAAATATAGTAAAAAT    200

BSNT_02537___    201 CGGGGAAGATGTAAT-CTTAGTCCGATTAAGTGAACCACATGCATAA    246
                     .||.||||||||.|| ||| ||||||||         |..|.|.|||
BPUM_1435___y    201 TGGCGAAGATGTGATACTT-GTCCGATT---------ATCTTCTTAA    237


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