Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02523 and BPUM_1420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence dna-align/BSNT_02523___sbp.1.24716.seq
# -bsequence dna-align/BPUM_1420___sbp.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02523___sbp-BPUM_1420___sbp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02523___sbp-BPUM_1420___sbp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02523___sbp
# 2: BPUM_1420___sbp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 383
# Identity: 289/383 (75.5%)
# Similarity: 289/383 (75.5%)
# Gaps: 31/383 ( 8.1%)
# Score: 1120.5
#
#
#=======================================
BSNT_02523___ 1 ATGTGGCTGCCCGTGTTGGGACTGGTGC-------TCGGAATAGCGATTG 43
||||||||.||.|| |||.| || |.||..|.|||||.|
BPUM_1420___s 1 ATGTGGCTTCCTGT------ACTTG-GCTTAATCATAGGGGTTGCGATCG 43
BSNT_02523___ 44 G-------ACTAATGACAAACTTAACGATACCGAGTGAATACTCAAACTA 86
| |||||| ||.||||||||||.|||.||.||.||.||
BPUM_1420___s 44 GTTTCTTAACTAAT-------TTTACGATACCGAATGAGTATTCCAATTA 86
BSNT_02523___ 87 TTTATCGCTTGCGGTGCTTGCCGCACTTGATACATTAATCGGCGGAATCA 136
|.|.||.||.||.||.|||||.||.|||||||||||.||.||.||.|||.
BPUM_1420___s 87 TCTTTCCCTCGCTGTACTTGCTGCGCTTGATACATTGATTGGTGGTATCC 136
BSNT_02523___ 137 GGGCGCATTTACAAGGTACATATGATGAAATGGTATTTGTTTCCGGTTTC 186
||||.|||.|.|||||..||||.||||||.|.||||||||.||.||.|||
BPUM_1420___s 137 GGGCACATCTGCAAGGGGCATACGATGAACTAGTATTTGTATCAGGCTTC 186
BSNT_02523___ 187 TTTTTTAATATTATATTGGCAATAAGTTTAGCTTTTCTGGGAGTCCATCT 236
||.||||||||||||.|||||||||||||||||||||||||.||||||||
BPUM_1420___s 187 TTCTTTAATATTATACTGGCAATAAGTTTAGCTTTTCTGGGCGTCCATCT 236
BSNT_02523___ 237 TGGTGTAGACTTGTATTTAGCAGGTATATTCGCATTTGGAGTCAGATTAT 286
|||||||||||||||.||||..||.||.||.|||||.||.||.|||||.|
BPUM_1420___s 237 TGGTGTAGACTTGTACTTAGTTGGAATGTTTGCATTCGGCGTTAGATTGT 286
BSNT_02523___ 287 TTCAGAATATAGCCGTTATCAGAAGAAATCTACTAACAAAGTGGACTCTT 336
||||.||||||||.||.||||||||||.||||||||||||.|||||..||
BPUM_1420___s 287 TTCAAAATATAGCAGTAATCAGAAGAATTCTACTAACAAAATGGACAATT 336
BSNT_02523___ 337 TCTA---AAAAAAATAAAAAAAATGTGATATAA 366
|||| |||||||.|||||||.||.|..||||
BPUM_1420___s 337 TCTAGAGAAAAAAAGAAAAAAAGTGAGTCATAA 369
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