Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02515 and BPUM_1415
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence dna-align/BSNT_02515___murG.1.24716.seq
# -bsequence dna-align/BPUM_1415___murG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02515___murG-BPUM_1415___murG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02515___murG-BPUM_1415___murG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02515___murG
# 2: BPUM_1415___murG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1133
# Identity: 834/1133 (73.6%)
# Similarity: 834/1133 (73.6%)
# Gaps: 79/1133 ( 7.0%)
# Score: 2980.5
#
#
#=======================================
BSNT_02515___ 1 ATGCGAATTGCAATAAGCGGAGGCGGTACAGGGGGACATATTTATCCTGC 50
|||||.||.|.|||.||.||||||||.|||||.||||||||||||||.||
BPUM_1415___m 1 ATGCGTATAGTAATCAGTGGAGGCGGAACAGGCGGACATATTTATCCGGC 50
BSNT_02515___ 51 GCTT-GCTTTTATTAAAGAAGTGCAAAGACGTCATCCTAATGTGGAATTT 99
||| ||.|||||||||||||||.||||.|..||||||.|||||||||||
BPUM_1415___m 51 -CTTAGCCTTTATTAAAGAAGTGAAAAGGCTGCATCCTGATGTGGAATTT 99
BSNT_02515___ 100 TTATATATTGGAACAGAAAACGGGCTGGAGAAAAAAATTGTTGAGCGGGA 149
|||||||||||.||.|||||.||.||.||.||.||||||||.||..|.||
BPUM_1415___m 100 TTATATATTGGTACTGAAAATGGACTTGAAAAGAAAATTGTAGAAAGAGA 149
BSNT_02515___ 150 GAATATACCGTTTC---GTTCAATTGAAATTACAGGATTTAAAAGAAAAT 196
.||||| ||.|||| | |.||.||||||.||||.||||||.|||||.
BPUM_1415___m 150 AAATAT-CCCTTTCAAGG--CGATAGAAATTTCAGGTTTTAAACGAAAAC 196
BSNT_02515___ 197 TGTCATTTGAAAATGTCAAGACTGTGATGCGTTTTCTGAAGGGCG-TCAA 245
|.||.|||||.||.|||||.||.||||||.|.|||.|.||.|||| ||||
BPUM_1415___m 197 TTTCCTTTGATAACGTCAAAACGGTGATGAGATTTTTAAAAGGCGTTCAA 246
BSNT_02515___ 246 AAAGAGTAAATCGTATTTAGCGGAATTTAAGCCCGATGCCGTAATTGGAA 295
||| ||.|||||.||.|||...|||||.|||||.|||||.||.|||||||
BPUM_1415___m 247 AAA-AGCAAATCTTACTTAAAAGAATTCAAGCCTGATGCGGTTATTGGAA 295
BSNT_02515___ 296 CGGGCGGTTATGTATGCGGGCCGGTTGTCTATGCCGCTGCGAAAATGGGA 345
|.|||||||||||.||.||.||.||.||.|||||.|||.|.||..||...
BPUM_1415___m 296 CAGGCGGTTATGTGTGTGGTCCTGTGGTTTATGCAGCTTCTAAGCTGAAG 345
BSNT_02515___ 346 ATTCCGACTATTGTCCATGAACAAAACAGCCTGCCGGGCATCACGAATAA 395
||.|||||||||.|.||.|||||||||||||||||.||.||.||.|||||
BPUM_1415___m 346 ATCCCGACTATTATACACGAACAAAACAGCCTGCCTGGTATTACAAATAA 395
BSNT_02515___ 396 GTTTCTTTCAAAATATGTTAATAAAGTAGCGATTTGTTTTGAAGAAGCGA 445
|||.||..|.|.||||||||||||.|||||.||.||.|||||.|||||.|
BPUM_1415___m 396 GTTCCTAGCGAGATATGTTAATAAGGTAGCCATATGCTTTGATGAAGCAA 445
BSNT_02515___ 446 AATCACATTTTCCTAGCGAGAAAGTTGTATTTACGGGAAACCCGCGAGCC 495
|..|||||||||||...||.||.||||||||||||||||||||..|||||
BPUM_1415___m 446 AGGCACATTTTCCTTCTGAAAAGGTTGTATTTACGGGAAACCCTAGAGCC 495
BSNT_02515___ 496 TCTGAAGTCGTCTCAAT-AAAGACGGGACGATCAATGGCT----GAATTT 540
||||||||||||||.|| |||||.|||| |||..|| ||||||
BPUM_1415___m 496 TCTGAAGTCGTCTCTATAAAAGAGGGGA-----AATCTCTTAAAGAATTT 540
BSNT_02515___ 541 GGGCTTTCTGAAGAGAAAAAAACGG-TCTTAATTTTCGGCGGAAGCCGAG 589
||||||..||||.|.|||||||||| |||| |||||||||||.|||||||
BPUM_1415___m 541 GGGCTTGATGAAAACAAAAAAACGGTTCTT-ATTTTCGGCGGGAGCCGAG 589
BSNT_02515___ 590 GCGCTGCACCGATTAACCGCGCTGTCATTGACATGCAGGATGCGCTGAAA 639
|||||||.||.||.||..|.||.||.|||||.|||||.|| |.|.|.|||
BPUM_1415___m 590 GCGCTGCTCCTATCAATAGAGCAGTGATTGAAATGCAAGA-GGGTTTAAA 638
BSNT_02515___ 640 -ACAAGAGACTATCAAGTGCTGTATATCACCGGTGAAGTTCACTATGAAA 688
.|||.|.||||.||..|..|.||||||||.||.||.|||||.|||||||
BPUM_1415___m 639 GGCAAAAAACTACCAGCTTTTATATATCACAGGCGAGGTTCATTATGAAA 688
BSNT_02515___ 689 AAGTAATGAATGAGCT----GAAAAGCAAGGGT--GCCGCTGATAATATG 732
|.||..|||||||.|| |||| ||||.| ||..| |||.|||
BPUM_1415___m 689 AGGTGTTGAATGAACTAAAGGAAA---AAGGTTTAGCATC---TAACATG 732
BSNT_02515___ 733 GTCACAAAGCCGTTTCTT-CATCAAATGCCTGAGTATTTAAAGGCCATTG 781
.|||||||.|| |||||| |||||.|||||.|||||..|||||.|.||.|
BPUM_1415___m 733 ATCACAAAACC-TTTCTTGCATCAGATGCCGGAGTACCTAAAGTCGATCG 781
BSNT_02515___ 782 ATGTCATTGTGGCCAGAGCCGGTGCGACAACGATTGCCGAAATTACTGCT 831
||||.|||||.||.|||||.||.||.|||||.|||||.|||.|.||.|||
BPUM_1415___m 782 ATGTGATTGTTGCAAGAGCAGGAGCTACAACTATTGCTGAAGTAACGGCT 831
BSNT_02515___ 832 CTCGGAATCCCAAGTGTTCTGATCCCGAGTCCATATGTGACAGCGAATCA 881
||.||||||||||...||.|.||.|||||.|||||.|||||.||.|||||
BPUM_1415___m 832 CTTGGAATCCCAACCATTTTTATTCCGAGCCCATACGTGACGGCAAATCA 881
BSNT_02515___ 882 CCAGGAGGTCAATGCGAGATCTCTCGGCCAGCATGATGCGGCGATTGTAC 931
.|||||..|||||||.|||||.||.|...|.||||||||.||||||||..
BPUM_1415___m 882 TCAGGAAATCAATGCAAGATCACTTGAAAAACATGATGCTGCGATTGTTT 931
BSNT_02515___ 932 TGAAAGAAACAGAGCTCAGCGGGGAGAAGCTGATTGAAGC--GCTA--GA 977
|.|.||||.|||||||.|..|||||....|||.| || |||| ||
BPUM_1415___m 932 TAAGAGAATCAGAGCTTACAGGGGATCGTCTGCT----GCATGCTATTGA 977
BSNT_02515___ 978 CCGAATTGTACTG--AATGAGCAAACGTTAAAGGAAATGAGC----GAAC 1021
...||||| ||| |||||..|||.|.|.||..|||||||| .|||
BPUM_1415___m 978 TGAAATTG--CTGGTAATGAAGAAAAGCTCAACCAAATGAGCCGTTTAAC 1025
BSNT_02515___ 1022 GAACAAAGTCACTCGGTGTTCCTGACGCGGCTGCCCGTTTATACAGCGTA 1071
|||..| ||||||.||.||.||.||||||.|.||||||||.|
BPUM_1415___m 1026 GAAAGA----ACTCGGAGTACCAGATGCGGCTACACGTTTATATA----- 1066
BSNT_02515___ 1072 CTCGAGGAATTAAAA-AAATAG----------- 1092
|.|..|||||| ||||..
BPUM_1415___m 1067 ----ATGTGTTAAAAGAAATTACGACTACATGA 1095
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