Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02515 and BPUM_1415

See Amino acid alignment / Visit BSNT_02515 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence dna-align/BSNT_02515___murG.1.24716.seq
#    -bsequence dna-align/BPUM_1415___murG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02515___murG-BPUM_1415___murG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02515___murG-BPUM_1415___murG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02515___murG
# 2: BPUM_1415___murG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1133
# Identity:     834/1133 (73.6%)
# Similarity:   834/1133 (73.6%)
# Gaps:          79/1133 ( 7.0%)
# Score: 2980.5
# 
#
#=======================================

BSNT_02515___      1 ATGCGAATTGCAATAAGCGGAGGCGGTACAGGGGGACATATTTATCCTGC     50
                     |||||.||.|.|||.||.||||||||.|||||.||||||||||||||.||
BPUM_1415___m      1 ATGCGTATAGTAATCAGTGGAGGCGGAACAGGCGGACATATTTATCCGGC     50

BSNT_02515___     51 GCTT-GCTTTTATTAAAGAAGTGCAAAGACGTCATCCTAATGTGGAATTT     99
                      ||| ||.|||||||||||||||.||||.|..||||||.|||||||||||
BPUM_1415___m     51 -CTTAGCCTTTATTAAAGAAGTGAAAAGGCTGCATCCTGATGTGGAATTT     99

BSNT_02515___    100 TTATATATTGGAACAGAAAACGGGCTGGAGAAAAAAATTGTTGAGCGGGA    149
                     |||||||||||.||.|||||.||.||.||.||.||||||||.||..|.||
BPUM_1415___m    100 TTATATATTGGTACTGAAAATGGACTTGAAAAGAAAATTGTAGAAAGAGA    149

BSNT_02515___    150 GAATATACCGTTTC---GTTCAATTGAAATTACAGGATTTAAAAGAAAAT    196
                     .||||| ||.||||   |  |.||.||||||.||||.||||||.|||||.
BPUM_1415___m    150 AAATAT-CCCTTTCAAGG--CGATAGAAATTTCAGGTTTTAAACGAAAAC    196

BSNT_02515___    197 TGTCATTTGAAAATGTCAAGACTGTGATGCGTTTTCTGAAGGGCG-TCAA    245
                     |.||.|||||.||.|||||.||.||||||.|.|||.|.||.|||| ||||
BPUM_1415___m    197 TTTCCTTTGATAACGTCAAAACGGTGATGAGATTTTTAAAAGGCGTTCAA    246

BSNT_02515___    246 AAAGAGTAAATCGTATTTAGCGGAATTTAAGCCCGATGCCGTAATTGGAA    295
                     ||| ||.|||||.||.|||...|||||.|||||.|||||.||.|||||||
BPUM_1415___m    247 AAA-AGCAAATCTTACTTAAAAGAATTCAAGCCTGATGCGGTTATTGGAA    295

BSNT_02515___    296 CGGGCGGTTATGTATGCGGGCCGGTTGTCTATGCCGCTGCGAAAATGGGA    345
                     |.|||||||||||.||.||.||.||.||.|||||.|||.|.||..||...
BPUM_1415___m    296 CAGGCGGTTATGTGTGTGGTCCTGTGGTTTATGCAGCTTCTAAGCTGAAG    345

BSNT_02515___    346 ATTCCGACTATTGTCCATGAACAAAACAGCCTGCCGGGCATCACGAATAA    395
                     ||.|||||||||.|.||.|||||||||||||||||.||.||.||.|||||
BPUM_1415___m    346 ATCCCGACTATTATACACGAACAAAACAGCCTGCCTGGTATTACAAATAA    395

BSNT_02515___    396 GTTTCTTTCAAAATATGTTAATAAAGTAGCGATTTGTTTTGAAGAAGCGA    445
                     |||.||..|.|.||||||||||||.|||||.||.||.|||||.|||||.|
BPUM_1415___m    396 GTTCCTAGCGAGATATGTTAATAAGGTAGCCATATGCTTTGATGAAGCAA    445

BSNT_02515___    446 AATCACATTTTCCTAGCGAGAAAGTTGTATTTACGGGAAACCCGCGAGCC    495
                     |..|||||||||||...||.||.||||||||||||||||||||..|||||
BPUM_1415___m    446 AGGCACATTTTCCTTCTGAAAAGGTTGTATTTACGGGAAACCCTAGAGCC    495

BSNT_02515___    496 TCTGAAGTCGTCTCAAT-AAAGACGGGACGATCAATGGCT----GAATTT    540
                     ||||||||||||||.|| |||||.||||     |||..||    ||||||
BPUM_1415___m    496 TCTGAAGTCGTCTCTATAAAAGAGGGGA-----AATCTCTTAAAGAATTT    540

BSNT_02515___    541 GGGCTTTCTGAAGAGAAAAAAACGG-TCTTAATTTTCGGCGGAAGCCGAG    589
                     ||||||..||||.|.|||||||||| |||| |||||||||||.|||||||
BPUM_1415___m    541 GGGCTTGATGAAAACAAAAAAACGGTTCTT-ATTTTCGGCGGGAGCCGAG    589

BSNT_02515___    590 GCGCTGCACCGATTAACCGCGCTGTCATTGACATGCAGGATGCGCTGAAA    639
                     |||||||.||.||.||..|.||.||.|||||.|||||.|| |.|.|.|||
BPUM_1415___m    590 GCGCTGCTCCTATCAATAGAGCAGTGATTGAAATGCAAGA-GGGTTTAAA    638

BSNT_02515___    640 -ACAAGAGACTATCAAGTGCTGTATATCACCGGTGAAGTTCACTATGAAA    688
                      .|||.|.||||.||..|..|.||||||||.||.||.|||||.|||||||
BPUM_1415___m    639 GGCAAAAAACTACCAGCTTTTATATATCACAGGCGAGGTTCATTATGAAA    688

BSNT_02515___    689 AAGTAATGAATGAGCT----GAAAAGCAAGGGT--GCCGCTGATAATATG    732
                     |.||..|||||||.||    ||||   ||||.|  ||..|   |||.|||
BPUM_1415___m    689 AGGTGTTGAATGAACTAAAGGAAA---AAGGTTTAGCATC---TAACATG    732

BSNT_02515___    733 GTCACAAAGCCGTTTCTT-CATCAAATGCCTGAGTATTTAAAGGCCATTG    781
                     .|||||||.|| |||||| |||||.|||||.|||||..|||||.|.||.|
BPUM_1415___m    733 ATCACAAAACC-TTTCTTGCATCAGATGCCGGAGTACCTAAAGTCGATCG    781

BSNT_02515___    782 ATGTCATTGTGGCCAGAGCCGGTGCGACAACGATTGCCGAAATTACTGCT    831
                     ||||.|||||.||.|||||.||.||.|||||.|||||.|||.|.||.|||
BPUM_1415___m    782 ATGTGATTGTTGCAAGAGCAGGAGCTACAACTATTGCTGAAGTAACGGCT    831

BSNT_02515___    832 CTCGGAATCCCAAGTGTTCTGATCCCGAGTCCATATGTGACAGCGAATCA    881
                     ||.||||||||||...||.|.||.|||||.|||||.|||||.||.|||||
BPUM_1415___m    832 CTTGGAATCCCAACCATTTTTATTCCGAGCCCATACGTGACGGCAAATCA    881

BSNT_02515___    882 CCAGGAGGTCAATGCGAGATCTCTCGGCCAGCATGATGCGGCGATTGTAC    931
                     .|||||..|||||||.|||||.||.|...|.||||||||.||||||||..
BPUM_1415___m    882 TCAGGAAATCAATGCAAGATCACTTGAAAAACATGATGCTGCGATTGTTT    931

BSNT_02515___    932 TGAAAGAAACAGAGCTCAGCGGGGAGAAGCTGATTGAAGC--GCTA--GA    977
                     |.|.||||.|||||||.|..|||||....|||.|    ||  ||||  ||
BPUM_1415___m    932 TAAGAGAATCAGAGCTTACAGGGGATCGTCTGCT----GCATGCTATTGA    977

BSNT_02515___    978 CCGAATTGTACTG--AATGAGCAAACGTTAAAGGAAATGAGC----GAAC   1021
                     ...|||||  |||  |||||..|||.|.|.||..||||||||    .|||
BPUM_1415___m    978 TGAAATTG--CTGGTAATGAAGAAAAGCTCAACCAAATGAGCCGTTTAAC   1025

BSNT_02515___   1022 GAACAAAGTCACTCGGTGTTCCTGACGCGGCTGCCCGTTTATACAGCGTA   1071
                     |||..|    ||||||.||.||.||.||||||.|.||||||||.|     
BPUM_1415___m   1026 GAAAGA----ACTCGGAGTACCAGATGCGGCTACACGTTTATATA-----   1066

BSNT_02515___   1072 CTCGAGGAATTAAAA-AAATAG-----------   1092
                         |.|..|||||| ||||..           
BPUM_1415___m   1067 ----ATGTGTTAAAAGAAATTACGACTACATGA   1095


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