Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02510 and BPUM_1411

See Amino acid alignment / Visit BSNT_02510 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence dna-align/BSNT_02510___murE.1.24716.seq
#    -bsequence dna-align/BPUM_1411___murE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02510___murE-BPUM_1411___murE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02510___murE-BPUM_1411___murE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02510___murE
# 2: BPUM_1411___murE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1597
# Identity:    1064/1597 (66.6%)
# Similarity:  1064/1597 (66.6%)
# Gaps:         227/1597 (14.2%)
# Score: 3317.5
# 
#
#=======================================

BSNT_02510___      1 ------ATGAAACTTACAA-AGCTGCTTACATACTT----------AACA     33
                           |||||| |||||| |.||||||||||||||          ||||
BPUM_1411___m      1 ATGAAAATGAAA-TTACAAGAACTGCTTACATACTTTAAAAGTGAAAACA     49

BSNT_02510___     34 ACCGAACCTTCTG-TAAACGACTCACAAGACCCTGAAATAACTTCAATTG     82
                     | ||||    .|| ||||||      ||.|.|||||.||.|||||.||||
BPUM_1411___m     50 A-CGAA----TTGATAAACG------AAAATCCTGATATCACTTCCATTG     88

BSNT_02510___     83 AGATGGACTCCAGGGAAGT-AAAGAAAGGG-AGTCTTTTTGTATGTGTAA    130
                     |.|||||.||.||.||.|| ||||  |||| ||.||||||||.|||.|||
BPUM_1411___m     89 AAATGGATTCAAGAGAGGTGAAAG--AGGGAAGCCTTTTTGTCTGTATAA    136

BSNT_02510___    131 AAGGGTATACGGTGGATGGCCACGATTTTGCGCAAAAAGCAGTAGAAAA-    179
                     ||||.|||||.||.|||||.||.||||..||..|||||||.|| ||||| 
BPUM_1411___m    137 AAGGCTATACAGTAGATGGACATGATTACGCTGAAAAAGCGGT-GAAAAG    185

BSNT_02510___    180 CGGTGCAGCGGCTATTGTGGCAGA---------------AAGAGAGGTCG    214
                     |||.||.||.||.|||||.|||||               ||.||      
BPUM_1411___m    186 CGGGGCTGCAGCCATTGTAGCAGAACACCCACTTAACATAACAG------    229

BSNT_02510___    215 ATGTGAATGTTCCTGTTATTATTGTCCGGCAGTCACTTCGCGCGCTC---    261
                           ||||.||.||.||||||||    .|..||||       |||   
BPUM_1411___m    230 ------ATGTACCAGTCATTATTGT----GAAACACT-------CTCAAA    262

BSNT_02510___    262 -AGCGTTT-------TGTCTGATGCGTTTTACGGACAGCCGACGAAGAAG    303
                      |||..||       |..|||||||||||||.|.||||||.||..|.|||
BPUM_1411___m    263 GAGCACTTGCAAGAATAGCTGATGCGTTTTATGAACAGCCCACTCATAAG    312

BSNT_02510___    304 CTTCAGCTGATTGGGATAACAGGGACAAACGGCAAAACATCAACGACCCA    353
                     ||..|.||.||||||||.||.||.|||||.||.|||||.|||||.||.||
BPUM_1411___m    313 CTGAATCTCATTGGGATCACTGGTACAAATGGAAAAACCTCAACAACACA    362

BSNT_02510___    354 CATGGTCGA-----TGAGATTCTGAAAAAAGCGG----GAAAACGCACAG    394
                     ||||.||||     |||     |||.||||||.|    ||||    ||||
BPUM_1411___m    363 CATGATCGAACAAGTGA-----TGAGAAAAGCCGAAAAGAAA----ACAG    403

BSNT_02510___    395 GCTTGATCGGTACAATGTACATGAAAATCGGA--GACGAAACACTTCCT-    441
                     ||||.||||||||.|||||.||||||.|  ||  ||.|    ||.|.|| 
BPUM_1411___m    404 GCTTAATCGGTACGATGTATATGAAAGT--GAATGATG----ACATTCTC    447

BSNT_02510___    442 ---GTTAAAAACACGACTCCGGAAAGCGTCACGCTGCAGAAAACGTTTAA    488
                        ||.|||||.||.||.||.|||||.|||||.||.||||||||||||||
BPUM_1411___m    448 GACGTGAAAAATACCACACCTGAAAGTGTCACACTTCAGAAAACGTTTAA    497

BSNT_02510___    489 GAAAATGAATGA-CAAGCATGTTGACACTGCAATCATGGAGGTTTCTTCC    537
                     ..|.|||..||| |||| ||||.|||||.||.||||||||.||.||.||.
BPUM_1411___m    498 ACAGATGCTTGATCAAG-ATGTAGACACAGCCATCATGGAAGTATCATCA    546

BSNT_02510___    538 CA--CGCTTTGTCTTTAGGACGCGTCCATGGCTGTGATTATGATATTGCC    585
                     ||  |.||...||||  ||..|.||.|||||.|||||||||||||||||.
BPUM_1411___m    547 CATGCCCTCCATCTT--GGCAGAGTACATGGATGTGATTATGATATTGCG    594

BSNT_02510___    586 GTGTTTACGAATTTAACACAGGACCATCTGGACTATCATAAAACGATGGA    635
                     ||.||.||.||..|.||||||||||||||.|||||.||.||.||.|||||
BPUM_1411___m    595 GTTTTCACAAACCTTACACAGGACCATCTTGACTACCACAACACAATGGA    644

BSNT_02510___    636 TGAGTACCGGCATGCAAAAAGCTTGCTCTTTTCCCAACTTGG-CGGGGCT    684
                     .||.||....|||||.|||||||||.|.|||||.||.||||| .|.|.||
BPUM_1411___m    645 AGAATATAAACATGCGAAAAGCTTGTTGTTTTCTCAGCTTGGAAGTGCCT    694

BSNT_02510___    685 TTCA--ACCATGAACATCCAAAGCGTGCCGTCCTGAATGCTGACGATGAG    732
                     ||||  ||.||.||   ||.||||.|||..|..|.|||||.||.||||||
BPUM_1411___m    695 TTCATCACAATAAA---CCGAAGCATGCGATTTTAAATGCAGATGATGAG    741

BSNT_02510___    733 G---CGAGCGCTTATTTTGAAAAGGTAACAGCTGCGCATATCTCTACAT-    778
                     |   ||||   ||||||||||||.||.||.|||||..|..|     ||| 
BPUM_1411___m    742 GCTTCGAG---TTATTTTGAAAAAGTCACTGCTGCTGAAGT-----CATG    783

BSNT_02510___    779 ACGGA--------ATTAAAAACGATGCTGATGTGATGGCGAAGAACA-TC    819
                     |||.|        |..|||||    ||.|||||.|||||.||.||.| ||
BPUM_1411___m    784 ACGTATGCCCTAGAGCAAAAA----GCAGATGTCATGGCAAAAAATATTC    829

BSNT_02510___    820 AGTATCACTGCAC--AGGG--CACAAGCTTTGATCTCGTGA---CAAACA    862
                     | .|||| ||| |  ||||  |.|||  ||||||.|.||.|   |||.| 
BPUM_1411___m    830 A-AATCA-TGC-CGAAGGGAACTCAA--TTTGATTTGGTCACTCCAATC-    873

BSNT_02510___    863 AAGGCACGAAGCACATCACGATGTCTCTCGTCGGACAATTTAATGTGTAT    912
                       |||||.|||.|..|.|||.|..|.||||||||..|.||.|||||||||
BPUM_1411___m    874 --GGCACCAAGAAAGTGACGGTTGCCCTCGTCGGGAAGTTCAATGTGTAT    921

BSNT_02510___    913 AACGTGCTGGCCGCT------GTTGCGACAT-GTATTGCAGCAGGCATAC    955
                     ||..|.||.||.|||      ||||.|  || ||||     |.|||.||.
BPUM_1411___m    922 AATATCCTTGCAGCTGTATCAGTTGGG--ATCGTAT-----CTGGCTTAA    964

BSNT_02510___    956 CGTTTGAAATCATCACTGAG-GCTGTTGAAGA-ATTGCATGGTGTAAGAG   1003
                     |.|||||.|..||| .|||| ||..||||||| .||| |.||.||.|.||
BPUM_1411___m    965 CATTTGAGACGATC-GTGAGTGCGATTGAAGAGCTTG-AAGGAGTCAAAG   1012

BSNT_02510___   1004 GCCGTTTTGAATTGGTCAATCAGC-AGCAGGAGTTTCCTGTCATTGTAGA   1052
                     ||.|.||||||.|.|| ||.|.|| |.||.||.||.||.|||||.||.||
BPUM_1411___m   1013 GCAGATTTGAACTTGT-AAACTGCGATCAAGATTTCCCGGTCATCGTCGA   1061

BSNT_02510___   1053 CTACGCGCACACACCGGACAGCCTTGAAAATGTGCTGGAGACATGCAGAG   1102
                     .||||||||.|||||.|||||..|.||||||||.||....||.||.||||
BPUM_1411___m   1062 TTACGCGCATACACCTGACAGTTTAGAAAATGTCCTCACAACGTGTAGAG   1111

BSNT_02510___   1103 ACATGACGGAAGG-AAAGCTATTTGTCGTTGTCGGCTGCGGAGGAGACAG   1151
                     |..|.||.||.|| |||..|.|.||| ||..|.||||||||.||.||..|
BPUM_1411___m   1112 AATTAACAGAGGGCAAAATTTTCTGT-GTGATTGGCTGCGGTGGTGATCG   1160

BSNT_02510___   1152 AGATAAGACGAAGCGCCCGAAAATGGCTAAAATTGCTGTGGAGCTGGCTG   1201
                     .|||||.||.|||||.||..||||||||.||||.||||||.|....||.|
BPUM_1411___m   1161 TGATAAAACAAAGCGTCCTCAAATGGCTCAAATCGCTGTGAAATATGCAG   1210

BSNT_02510___   1202 ACGAGCCGATTTTCACGTCAGATAACCCGAGAAGCGAAGATCCTCGCGCG   1251
                     |.||.||..|.||.||||||||.|||||.|||||||||||||||...||.
BPUM_1411___m   1211 ATGAACCTGTATTTACGTCAGACAACCCAAGAAGCGAAGATCCTTCAGCC   1260

BSNT_02510___   1252 ATTTTAAGAGATATGGAAGCCGGAGTA-GAGAACGCATACTATCACAGTA   1300
                     |||||||.||||||||||...||.||| .|| |||||||.|||||.||..
BPUM_1411___m   1261 ATTTTAAAAGATATGGAAAATGGGGTACCAG-ACGCATATTATCATAGCT   1309

BSNT_02510___   1301 TTGCAAACCGCGAGCAGGCGATCTTTTTCGCAATTGCCAATGCCAAAAAA   1350
                     |||..||.||..|.||.|||||.||.||.||.|||||||||||.||||||
BPUM_1411___m   1310 TTGTGAATCGGAAACAAGCGATTTTCTTTGCCATTGCCAATGCAAAAAAA   1359

BSNT_02510___   1351 GGCGACGTTGTCCTCATTGCCGGAAAAGGACATGAAACCTATCA------   1394
                     |||||....|||||.||.||.||.|||||.|||||.||||||||      
BPUM_1411___m   1360 GGCGATACAGTCCTAATAGCGGGTAAAGGCCATGAGACCTATCAAATTAT   1409

BSNT_02510___   1395 --GCAGATCGGAAATGAAACTTTCGATTTTGATGATGCTGAAGTAGC-GG   1441
                       || ||||  ||.|    ||.| ||.|||||||||||..||.|.|| |.
BPUM_1411___m   1410 TGGC-GATC--AAGT----CTAT-GACTTTGATGATGCAAAAATTGCTGT   1451

BSNT_02510___   1442 CGAGAGCCATTGTTGAACTCAATAAGAA---TAAGACGAATTCATAG   1485
                     .|| .||.|||.|.||.||.||.|  ||   |||             
BPUM_1411___m   1452 TGA-CGCTATTTTAGACCTAAACA--AATCTTAA-------------   1482


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.