Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02507 and BPUM_1409
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_02507___pbpB.1.24716.seq
# -bsequence dna-align/BPUM_1409___ftsI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02507___pbpB-BPUM_1409___ftsI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02507___pbpB-BPUM_1409___ftsI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02507___pbpB
# 2: BPUM_1409___ftsI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2256
# Identity: 1523/2256 (67.5%)
# Similarity: 1523/2256 (67.5%)
# Gaps: 210/2256 ( 9.3%)
# Score: 4833.5
#
#
#=======================================
BSNT_02507___ 1 ATGATTCAAATGCCAAAAAAGAATAAATTTATGAATAGAGGAGCAGCGAT 50
|||||.||||||||||||.|.|||||.|||||.||.||.||
BPUM_1409___f 1 ---------ATGCCTAAAAAGAATAAAATGATGAACAGAGGCGCGGCAAT 41
BSNT_02507___ 51 TCTAAGTATTTGTTTCGCTCTCTTTTTCTTTGTCATCCTGGGGAGAATGG 100
|..|||||||||.|||||.||.|||||||||.|||||| |.|
BPUM_1409___f 42 TGCAAGTATTTGCTTCGCCCTGTTTTTCTTTATCATCC---------TAG 82
BSNT_02507___ 101 CA---------TATATTCAAATAACCGGAAAAGCGAACGGCGAAGTGCTT 141
|| |||||||||||.||.||||..|...|.||..||||..|.
BPUM_1409___f 83 CACGTTTTATCTATATTCAAATTACTGGAACGGTTGATGGACAAGTATTA 132
BSNT_02507___ 142 GCGACAAAAGCGACAGAGCAGCATGAA---AAGAAACGGACCATCGAAGC 188
||..|.||.||.|..||.||..||.|| |||||| ||..|.|||||
BPUM_1409___f 133 GCCGCTAAGGCAAATGAACAATATCAATCGAAGAAA---ACACTTGAAGC 179
BSNT_02507___ 189 GAGCCGCGGCTCGATTTTAGACCGAAAAGGAAAAGTCATTGCAGAGGACA 238
.|...|.||.||.|||||||||||.||.|||||.||.||.||.|||||.|
BPUM_1409___f 180 CAAAAGGGGATCTATTTTAGACCGGAATGGAAATGTGATCGCTGAGGATA 229
BSNT_02507___ 239 CAGCGACGTATAAACTGATTGCGATTCTCGA-TAAAAAAATGACCACT-G 286
||.|...|||||||||.|||||| .||..|| .||.||||||| ||.| |
BPUM_1409___f 230 CATCTGTGTATAAACTTATTGCG-GTCATGAGCAAGAAAATGA-CAGTGG 277
BSNT_02507___ 287 ATGTCAAGCATCCTCAGCATGTTGTAAACAAAGAAAAAACGGCGGAAGCA 336
||.|.||||||||...||||||.||..|.||||||||.|||||..|||..
BPUM_1409___f 278 ATCTTAAGCATCCAATGCATGTCGTCGATAAAGAAAAGACGGCAAAAGAG 327
BSNT_02507___ 337 TTGTCTAAAGT----GATAAACTTGGACAAGGCCGACATCCTTGATATCT 382
.|.||.||||| |||| || || |||.|.| ||.||.|
BPUM_1409___f 328 CTCTCAAAAGTCATCGATA----TG----AG--CGAAAGC---GAAATTT 364
BSNT_02507___ 383 TAAA------------TAAAGATGCAAAACAAGTCGAGTTTGGCTCAGCT 420
|||| .|||||||||...|||||.||||||||...|||.
BPUM_1409___f 365 TAAAGCGTCTCAATACAAAAGATGCATTCCAAGTGGAGTTTGGTAAAGCG 414
BSNT_02507___ 421 GGCCGGGATATTACGTATTCACAAAAGCAAAAAATTGAAAAAATGAAACT 470
||...||||||||..|.||||...|||.|||||||||||||..|.|||||
BPUM_1409___f 415 GGGAAGGATATTAGTTTTTCAACGAAGGAAAAAATTGAAAAGCTAAAACT 464
BSNT_02507___ 471 CCCGGGCATTTCATTTTTG--CGGGATACAAAACGCTACTATCCAAATGG 518
.||.||.|||.| ||||| ...||.||.||.|||||.||||||||.||
BPUM_1409___f 465 TCCAGGTATTGC--TTTTGAAAAAGACACGAAGCGCTATTATCCAAACGG 512
BSNT_02507___ 519 TATTTTCGCATCCAATTTAATCGGCTATGCCGAGGTT-GATCAAGACACA 567
.||.||.||.||.||..|.|||||.||.||| ||.|| .||.|.|..|||
BPUM_1409___f 513 CATGTTTGCCTCTAACCTCATCGGTTACGCC-AGATTAAATGAGGCGACA 561
BSNT_02507___ 568 AATGAAATTTCCGGCGCGATGGGGTTAGAAAAAGTGCTGGATAAGTATTT 617
||.||.||.||.||.||.|||||..|.||.||.|..|||.|.||.|||||
BPUM_1409___f 562 AAGGACATGTCAGGTGCAATGGGACTTGAGAAGGCACTGAACAAATATTT 611
BSNT_02507___ 618 GAAGGAGCGCGACGGATATGTGACATATGAAAGCGACAAATCCGGCTGGG 667
.||.||....|||||.||||||||||||.|.||.||||.|..|||.||||
BPUM_1409___f 612 AAAAGAAAAAGACGGCTATGTGACATATAACAGTGACAGAAGCGGATGGG 661
BSNT_02507___ 668 AGCTCCCGAACAGCAAAAATAAAATTACAGCGCCAAAAAATGGTGACAAT 717
...|.|||||.||.|||.|..|.|||...||.||.|||.|.||..|.|||
BPUM_1409___f 662 CCTTACCGAATAGTAAAGAAGACATTGTCGCACCGAAAGACGGGAAAAAT 711
BSNT_02507___ 718 GTATATTTAACCATTGACCAGAATATTCAAACCTTTTTGGAAGACAGTAT 767
||.....|.||||||||.|||||.||.|||.|.|||.|.|||||.|||||
BPUM_1409___f 712 GTCACGCTGACCATTGATCAGAAAATACAAGCGTTTCTTGAAGAAAGTAT 761
BSNT_02507___ 768 GACAAAAGTGGCGCAAAAGTATAATCCGAAAAAAATCATGGCCGCAGTCG 817
||||.|.||.||..||||||||||.|||||.||||||||.||..||||||
BPUM_1409___f 762 GACACAGGTTGCCAAAAAGTATAAGCCGAAGAAAATCATTGCTACAGTCG 811
BSNT_02507___ 818 TTGATCCGAAAACGGGCAAAGTCCTTGCCATGGGACAGCGCCCAAGCTTT 867
|||||||||||||.||.||.||.||.||.|||||||||||.|||||||||
BPUM_1409___f 812 TTGATCCGAAAACTGGAAAGGTTCTCGCAATGGGACAGCGACCAAGCTTT 861
BSNT_02507___ 868 GAT----CCGAACAAGCGCGATGTGACAAACTACTATAATGATTTGATTT 913
.|| ..||||.| ||..|.||.||.||..|.||||||.||||||
BPUM_1409___f 862 AATTTAAATGAACTA----GACATTACGAATTATAACAATGATGTGATTT 907
BSNT_02507___ 914 CATATGCGTATGAGCCCGGATCAACGATGAAGATCTTTACACTCGCTGCT 963
|||||||||.|||.||.||.||||||||||||||||||||..|.|||||.
BPUM_1409___f 908 CATATGCGTTTGAACCAGGTTCAACGATGAAGATCTTTACCTTAGCTGCG 957
BSNT_02507___ 964 GCGATGCAGGAAAACGTGTTT---AATGCGAACGAAAAATATAAATCAGG 1010
|||||.|| |.||.|.||.| ||.|| ||.||.||||||.||||.||
BPUM_1409___f 958 GCGATCCA--AGAAGGGGTCTACCAAGGC-AATGATAAATATCAATCTGG 1004
BSNT_02507___ 1011 GACATTTGAAGTTGGCGGAGCACCTGTCAGGGACCATAATAGAGGAATAG 1060
.||.|.|.||||.|||||.|.||.|||.||.|||||.||.|..||||..|
BPUM_1409___f 1005 TACTTATAAAGTAGGCGGCGGACTTGTAAGAGACCACAACAATGGAAATG 1054
BSNT_02507___ 1061 GCTGGGGACCGACAA-----CCTATCATGACGGCGTTCTAAGATCGTCGA 1105
||||||| ||| ..|.||||.|.||.|||||..|.||.||.|
BPUM_1409___f 1055 GCTGGGG-----CAAAATTGATTTTCATCAAGGGGTTCTTCGCTCATCAA 1099
BSNT_02507___ 1106 ATGTCGCTTTTGCGAAACTGGCGAAAGAAAAGCTGGGATATGAC-CGCCT 1154
|.||.||.|||||.||.||.||.||||||||.||.||.| |.|| |||..
BPUM_1409___f 1100 ACGTGGCCTTTGCAAAGCTCGCAAAAGAAAAACTAGGCT-TCACACGCTA 1148
BSNT_02507___ 1155 CAATCAATATTTGCACAAATTCAATTTTTACCAGAAAACAGGTATTGATT 1204
|.|.|||||||||||.||.|||.||||.||..|.|||||.||.|||||||
BPUM_1409___f 1149 CGAACAATATTTGCAGAAGTTCCATTTCTATGACAAAACGGGGATTGATT 1198
BSNT_02507___ 1205 TGCCTG---GAGAAGTCTCCAGCAAAATCAACTTTAAATATGAATTTGAT 1251
|||| | |||..|||| |||||||||||.|.||.||||||||.|||.
BPUM_1409___f 1199 TGCC-GAACGAGGCGTCT--AGCAAAATCAATTATAGATATGAATATGAC 1245
BSNT_02507___ 1252 AAGGCGTCAACTGCATATGGCCAAGCGTCTGCGGTCACACCAATTCAGCA 1301
||.||.||.|||||.|||||.|||||.||.||..|||||||.|||||.||
BPUM_1409___f 1246 AAAGCATCGACTGCTTATGGTCAAGCATCAGCTATCACACCGATTCAACA 1295
BSNT_02507___ 1302 GATTCAGGCCGCAACGGCAATTGCAAATGACGGCAAAATGATGAAACCTT 1351
.|||.|.||.||.||.||.||.|||||||.|||.|.|||||||||.||.|
BPUM_1409___f 1296 AATTGAAGCAGCCACAGCGATAGCAAATGGCGGAACAATGATGAAGCCAT 1345
BSNT_02507___ 1352 ATGTGATTGACCATATCGTTGATCCCG-ATAAAGATAAAACTATTTATCA 1400
||||.|||||||||||....|| |||| |.|.|.|.|||||.||||..||
BPUM_1409___f 1346 ATGTCATTGACCATATTACAGA-CCCGAACACAAACAAAACGATTTTGCA 1394
BSNT_02507___ 1401 AAATAAGCCGGAATCAGCCGGAACCCCAATTTCTGCAAGC----ACAGCG 1446
..|..|.||...|.||||.||||..|||||||| |.| ||||||
BPUM_1409___f 1395 GCACGAACCAACAGCAGCAGGAAAACCAATTTC----ATCTGATACAGCG 1440
BSNT_02507___ 1447 AAAAAGGTGCGGGATATATTGGGAGAAGTTGTTACGTCGAAAATCGGAAC 1496
||..|.||.||.||.||.||.||.||.||||||.|.||.|||||.|||||
BPUM_1409___f 1441 AAGCAAGTCCGTGACATTTTAGGTGAGGTTGTTTCTTCAAAAATTGGAAC 1490
BSNT_02507___ 1497 AGGGCAAGCATATAAAATCGAAGGTTTTGATGTTGCCGGGAAAACAGGTA 1546
|||.||..|.||..|||||.||||.||.||.|||||.|||||||||||.|
BPUM_1409___f 1491 AGGTCAGCCTTACCAAATCAAAGGCTTCGACGTTGCTGGGAAAACAGGAA 1540
BSNT_02507___ 1547 CTGCGCAAATAGCCGGTAAAGGCGGATATTTA--------GACGGCACAG 1588
|.|.||||||.|..|||...||||| ||| ||||..|| |
BPUM_1409___f 1541 CGGGGCAAATTGGTGGTGCCGGCGG----TTACCTCCAAGGACGAAAC-G 1585
BSNT_02507___ 1589 ATAACTATATCTTTTCTTTTATGGGTATGGCGCCAAAAGATGATCCTGAG 1638
|| |||.|||||||.||||||||.||||||||||||||||||||..||
BPUM_1409___f 1586 AT---TATGTCTTTTCATTTATGGGAATGGCGCCAAAAGATGATCCGAAG 1632
BSNT_02507___ 1639 CTTTTAATTTATGTTGCTGTACAGCAGCCGCAACT-----AAAAGCAGGA 1683
||..|..|.|||||.|||||.|||||||||||.|| ||| |||
BPUM_1409___f 1633 CTACTTGTGTATGTGGCTGTTCAGCAGCCGCAGCTGTCTGAAA--CAG-- 1678
BSNT_02507___ 1684 CAAAGCAGTTCAGATCCAGTATCAGAAATCTTCAATCCAACAATGAAAAA 1733
|||...|.||.|.|||.||.||..|||||||.||.||....||||||||
BPUM_1409___f 1679 -AAACGGGGTCGGCTCCGGTTTCTCAAATCTTTAACCCTGTCATGAAAAA 1727
BSNT_02507___ 1734 TAGCCTGCACTACCTAAACATCGAACCAAC------------TGAAAAAT 1771
|||..|||..||..||||.||.|.|||||| |.||||||
BPUM_1409___f 1728 TAGTTTGCTATATTTAAATATTGCACCAACAAAAACAGACGATAAAAAAT 1777
BSNT_02507___ 1772 CTGACTCAGATAAGGAAGAAACAA-AAGCGCAGACAATGCCT-------- 1812
|.|.|..|||.||.| .||||||| || ||.||||||
BPUM_1409___f 1778 CAGGCGAAGAAAAAG-TGAAACAAGAA------ACGATGCCTTCATACCT 1820
BSNT_02507___ 1813 -GATTTAACAGATCAAAC-GGTAGCTGCTGCTCAAAAGA-AAGCAAAAGA 1859
||||||..|| |.||.| ||.|| |||.| ||||.|||.|
BPUM_1409___f 1821 GGATTTAGAAG-TGAAGCAGGCAG----------AAACAGAAGCCAAAAA 1859
BSNT_02507___ 1860 GGAGAATCTCACACCAATTGTCATCGGCAGTGATG---TCGCTGTAAAAG 1906
|.|.||..|.||.||..||||||||||| ||.| ||.|..|.|||.
BPUM_1409___f 1860 GAAAAACTTAACGCCTGTTGTCATCGGC---GACGGGCTCTCCATTAAAC 1906
BSNT_02507___ 1907 AACAGTATCCGAAAG-CGGATGAGGAAGTTCTCACCAA-TCAAAAGGTCT 1954
..||||..||||..| |||.|..| |.|||||...|| .||.||.||.|
BPUM_1409___f 1907 GCCAGTGGCCGAGTGCCGGCTCTG--AATTCTCTGAAAGCCAGAAAGTGT 1954
BSNT_02507___ 1955 TCCTGAAAACGGGCGGCAAA---ATCAAAATGCCTGATATGACAGGCTGG 2001
||.|||||||.|..||.||| ||.||.|||||||||||||||||||||
BPUM_1409___f 1955 TCTTGAAAACAGCAGGTAAAACCATTAAGATGCCTGATATGACAGGCTGG 2004
BSNT_02507___ 2002 TCGAGAAGAGAGGTTCTGCAGTA--CGGCGAGCTCGCGGGAATTCATATT 2049
||.|||||.||.||.||.||.|| |..||| |.||.||..|.|||||.
BPUM_1409___f 2005 TCCAGAAGGGAAGTCCTTCAATATGCTTCGA--TTGCCGGTGTGCATATA 2052
BSNT_02507___ 2050 GAAGTAAGCGGACAAGGCTACGCTGTCAGCCAAAGTGTTAAGAAAG---- 2095
|||..||..||||||||.||.|||||.|..||||||||.| ||||
BPUM_1409___f 2053 GAAACAAATGGACAAGGATATGCTGTGAAACAAAGTGTCA--AAAGTGGA 2100
BSNT_02507___ 2096 ACAAAGAAATCAAAGACAAAACCGTAATCAAGGTTAAGTTTAAAAATCCT 2145
.||.|||..|| ||||||| ||..|||..||.|..|||||||.|||.
BPUM_1409___f 2101 GCAGAGATTTC--AGACAAA---GTCGTCACTGTGACATTTAAAAGTCCA 2145
BSNT_02507___ 2146 GATTAA 2151
.|||||
BPUM_1409___f 2146 AATTAA 2151
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