Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02506 and BPUM_1408
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_02506___ftsL.1.24716.seq
# -bsequence dna-align/BPUM_1408___ftsL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02506___ftsL-BPUM_1408___ftsL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02506___ftsL-BPUM_1408___ftsL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02506___ftsL
# 2: BPUM_1408___ftsL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 230/399 (57.6%)
# Similarity: 230/399 (57.6%)
# Gaps: 96/399 (24.1%)
# Score: 598.0
#
#
#=======================================
BSNT_02506___ 1 ATGAGCAATTTAGCTTACCAACCAGAG---------------AAACAGCA 35
|||||.|||||.|||||.||| |||| |||||| |
BPUM_1408___f 1 ATGAGTAATTTGGCTTATCAA--AGAGAAGTGAAGCAACATCAAACAG-A 47
BSNT_02506___ 36 GCGGCATGCGATCAGTCCTGAGAAAAAAGTGATTGTC-----AAGAAAAG 80
||.||| ||.|| ||..|.||||| |||||.||
BPUM_1408___f 48 GCAGCA-------AGGCC--------AATCGGTTGTCATTAAAAGAAGAG 82
BSNT_02506___ 81 GGCTTCCATTACTCTCGGAGAAAAAGTGCTT-CTTGTCCTCTTTGCTGCG 129
| |||.||.||.||.||.||||||.| ||| ||||||.|.||||....|
BPUM_1408___f 83 G--TTCTATCACACTTGGTGAAAAAAT-CTTACTTGTCATGTTTGTCATG 129
BSNT_02506___ 130 GC-----GGTGCTCAGCGTATCGCTTTTGATCGTATCGAAGGCGTATGCG 174
|| .||| |||| |||.||.|.|||.|.||.||.||.|.|||.
BPUM_1408___f 130 GCTCTTATGTG--CAGC---TCGATTCTCATCATTTCTAAAGCTTTTGCT 174
BSNT_02506___ 175 GCATATCAAACCAATATTGAGGTGCAAAAGCTTGAGGAGCAAATTTCATC 224
|..|||||..|||||||.||.|||||.|||||.||..|||||.|.||.|.
BPUM_1408___f 175 GTCTATCATGCCAATATCGAAGTGCAGAAGCTAGAACAGCAAGTATCTTT 224
BSNT_02506___ 225 CGAAAATAAGCAAAT---TG-GTGACCTCGA-----AAAAAGCGTTGCTG 265
.|||...|||.|||| || ||.|| | ||||||..||||||
BPUM_1408___f 225 AGAATCGAAGAAAATCACTGAGTTAC----AAAAGGAAAAAGACTTGCTG 270
BSNT_02506___ 266 ATTTAAGC--AAACCGCAGCGCATTATGGACATTGCGAAAAAGAAC-GGC 312
|.|.||.| ||| |.||.||.||...||| |||||.|.| |||
BPUM_1408___f 271 AGTGAACCAGAAA-------GAATCATCGAAGCTGC-AAAAAAAGCAGGC 312
BSNT_02506___ 313 TTGAATTTA---AAAGA---TAAAAAAGT-GAAAAACATACAGGAATGA 354
||.|...|| ||||| |||.||.|| ||..||
BPUM_1408___f 313 TTAAGCATATCGAAAGATGTTAAGAAGGTCGATTAA------------- 348
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