Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02505 and BPUM_1407
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_02505___mraW.1.24716.seq
# -bsequence dna-align/BPUM_1407___mraW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02505___mraW-BPUM_1407___mraW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02505___mraW-BPUM_1407___mraW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02505___mraW
# 2: BPUM_1407___mraW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 949
# Identity: 700/949 (73.8%)
# Similarity: 700/949 (73.8%)
# Gaps: 29/949 ( 3.1%)
# Score: 2472.5
#
#
#=======================================
BSNT_02505___ 1 ATGTTTCAACACAAGACAGTACTTCTT-CGTGAAACCGTAGACGGACTTA 49
|||||||||||..|||||||| ||.|| ...|||||.||.|||||..|.|
BPUM_1407___m 1 ATGTTTCAACATGAGACAGTA-TTATTAAAAGAAACAGTTGACGGTTTAA 49
BSNT_02505___ 50 ATATTAAACCAGACGGTACATATGTAGACTGCACACTCGGCGGAGCTGGG 99
|..|.|||..|||||||||||||||.||||||||.||.||||||||.||.
BPUM_1407___m 50 ACGTAAAAGAAGACGGTACATATGTGGACTGCACGCTAGGCGGAGCAGGT 99
BSNT_02505___ 100 CATAGTACATACTTATTGCAGCAGTTATCCGAGAAGGGGCGTTTAATCGC 149
|||||..||||.|||.|....||.|||||.||.||.||....||.||.|.
BPUM_1407___m 100 CATAGCTCATATTTACTATCTCAATTATCAGAAAAAGGTACATTGATTGG 149
BSNT_02505___ 150 TTTTGACCAAGATGATACGGCATTACAGCATG--CTAAAGAAGTGTTGTC 197
||||||||||||.|||.|.|||.|..|.|||| |.|.|||| |.|..|
BPUM_1407___m 150 TTTTGACCAAGACGATGCTGCACTGGATCATGCACGAGAGAA--GCTCGC 197
BSNT_02505___ 198 CGATTATAAAG-GACAGCTCATTC---TGATTAAAAGCAATTTCAGGTAT 243
.|.||.||||| || .||||| |.||.||||||||.|||.|.|||
BPUM_1407___m 198 GGGTTCTAAAGCGA----ACATTCTTTTCATAAAAAGCAACTTCCGATAT 243
BSNT_02505___ 244 TTAAAAGAATGTTTGAATGAACAAGGCATTACAGAAGTAGACGGTATTTT 293
|||||||||.||.|||||||||||||.||||||...|||||.|||.|..|
BPUM_1407___m 244 TTAAAAGAACGTCTGAATGAACAAGGTATTACAAGCGTAGATGGTGTGAT 293
BSNT_02505___ 294 ATTTGATTTAGGGGTGTCCTCTCCGCAGCTGGATACACCTGAGCGCGGAT 343
.||||||.|.|||||.||.|||||.|||||.||.|||||.|||.|.||.|
BPUM_1407___m 294 TTTTGATCTTGGGGTATCATCTCCTCAGCTCGACACACCAGAGAGAGGCT 343
BSNT_02505___ 344 TCAGTTACCATCATGACGCACCGTTGGACATGAGGATGGACCAGTCGGCT 393
|.|||||.||||||||.|||||..|.||||||.|.|||||.||.||.||
BPUM_1407___m 344 TTAGTTATCATCATGATGCACCTCTTGACATGCGAATGGATCAATCAGC- 392
BSNT_02505___ 394 ACGC--TTTCGGCGAAAGAAGTCGTTAATGAGTGGCGCTATGAGGATCTC 441
||| |.|||||.|||.||||.||.|||||.||||..|.|||.|||||.
BPUM_1407___m 393 -CGCATTGTCGGCAAAAAAAGTGGTCAATGAATGGCCATTTGAAGATCTA 441
BSNT_02505___ 442 GTCCGTATTTTCTTTAAATACGGAGAAGAGAAGTTCAGTAAACAGATCGC 491
||.||.|||||||..|||||.||.|||||.||||||||.||.||.|||||
BPUM_1407___m 442 GTTCGGATTTTCTACAAATATGGGGAAGAAAAGTTCAGCAAGCAAATCGC 491
BSNT_02505___ 492 CAGAAAAATTGAGGAGGCAAGAATGAAGTCTCCTATTCAAACTACGGGCC 541
..|.||||||||.||.|||||||..||..|.||.|||.||||.|||||..
BPUM_1407___m 492 ACGCAAAATTGAAGAAGCAAGAAAAAAAGCGCCAATTGAAACAACGGGTG 541
BSNT_02505___ 542 AACTGGTCGATCTAATAAAAGACGCGATTCCCGCTCCAGCGAGAAGGAGC 591
|.||.|||||..|.||.|||||.|..|||||.||.||.||.|||.|.|..
BPUM_1407___m 542 AGCTTGTCGACATCATCAAAGAAGGAATTCCGGCACCTGCAAGACGAACT 591
BSNT_02505___ 592 GGCGGACATCCCGCTAAACGCGTGTTTCAGGCAATCAGAATTGCCGTAAA 641
|||||||||||.||.|||.|.||||||||.||.|||.|||||||||||||
BPUM_1407___m 592 GGCGGACATCCAGCGAAAAGAGTGTTTCAAGCGATCCGAATTGCCGTAAA 641
BSNT_02505___ 642 CGATGAACTTAGGGTGTTTGAAGAAGCTTTGGAGCAGGCAATTGAGGTTC 691
.||||||.|.|..||.|||||||||||..|.||.||.|||||.|||.|.|
BPUM_1407___m 642 TGATGAATTGAAAGTATTTGAAGAAGCACTAGAACAAGCAATAGAGTTAC 691
BSNT_02505___ 692 TGAAGCC--AGGGGGCAGGGTATCGGTCATTACCTTCCACTCGCTAGAAG 739
|.||.|| ||||| ||..|.||.||||||||.|||||.||.||.||||
BPUM_1407___m 692 TCAATCCGAAGGGG--AGAATTTCTGTCATTACATTCCATTCACTTGAAG 739
BSNT_02505___ 740 ACAGAATTTGCAAAACCACTTTTAAAGAAAAGTCGTCGCTTCCGGAACTT 789
||.|.|||||.||||..||.||||.|||||.|||.||.|||||.||||||
BPUM_1407___m 740 ACCGGATTTGTAAAAGTACATTTAGAGAAATGTCTTCTCTTCCAGAACTT 789
BSNT_02505___ 790 CCTCCGGGGCTTCCTGTTATACCGGAAGAGTTTGAACCGGAGCTGAAGCT 839
||.|..||.||.||.||.||.||.||||...|||||||..||||||||||
BPUM_1407___m 790 CCGCACGGACTACCAGTGATTCCAGAAGGACTTGAACCAAAGCTGAAGCT 839
BSNT_02505___ 840 CATCACACGAAAACCGATTACG--GCATCTCAAGAAGAGCTTGAAGAGAA 887
.|||||..|||||||||| || |||||..||.|||||||.|||.|.||
BPUM_1407___m 840 GATCACGAGAAAACCGAT--CGTTGCATCAGAACAAGAGCTGGAACATAA 887
BSNT_02505___ 888 CAACCGGGCTCGTTCTGCCAAGCTTCGGATTGCTGAAAAAAGAAAATAA 936
||||||.||.|||||.||.|||||.||.|||||.||||| |||.|||
BPUM_1407___m 888 CAACCGTGCCCGTTCAGCGAAGCTCCGAATTGCAGAAAA---AAAGTAA 933
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