Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02504 and BPUM_1406
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_02504___mraZ.1.24716.seq
# -bsequence dna-align/BPUM_1406___mraZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02504___mraZ-BPUM_1406___mraZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02504___mraZ-BPUM_1406___mraZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02504___mraZ
# 2: BPUM_1406___mraZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 323/451 (71.6%)
# Similarity: 323/451 (71.6%)
# Gaps: 68/451 (15.1%)
# Score: 1314.0
#
#
#=======================================
BSNT_02504___ 1 GTGGGGCAAGAGATCATGTTTATGGGTGAATATCAGCATACCATCGATGC 50
BPUM_1406___m 0 -------------------------------------------------- 0
BSNT_02504___ 51 GAAAGGCCGCATGATCGTACCCGCTAAATTTAGAGAAGGCCTAGGTGAGC 100
||||||.|.||.||||||||||||||.||.||.||.||.|
BPUM_1406___m 1 ----------ATGATCATCCCTGCTAAATTTAGAGACGGTCTCGGAGAAC 40
BSNT_02504___ 101 AATTTGTGCTGACTAGAGGACTTGACCAATGTCTCTTCGGCTACCCTATG 150
|.|||||||||||.|||||.|||||.||||||.|.||.||||||||||||
BPUM_1406___m 41 AGTTTGTGCTGACGAGAGGGCTTGATCAATGTTTATTTGGCTACCCTATG 90
BSNT_02504___ 151 CACGAATGGAAACAAATTGAAGAAAAACTAAAAGCTCTGCCTCTCACAAA 200
...||.|||||||.|||.|||||.|||||.|||||.||.||.||.||.||
BPUM_1406___m 91 AGTGAGTGGAAACTAATCGAAGAGAAACTCAAAGCACTACCGCTAACGAA 140
BSNT_02504___ 201 GAAAGATGCCCGCGCGTTTACCCGTTTCTTCTTTTCAGGGGCGACT-GAA 249
.||||||||.||.|||||||||||.||||||||.||.||.|| |.| |||
BPUM_1406___m 141 AAAAGATGCACGTGCGTTTACCCGGTTCTTCTTCTCTGGCGC-AGTCGAA 189
BSNT_02504___ 250 TGCGAACTGGACAAGCAAGGCAGGGTA--AATATCGCATCATCTCTATTG 297
|||||.|||||||||||.|| |.||| ||.|||||||||...|||.|.
BPUM_1406___m 190 TGCGATCTGGACAAGCAGGG--GCGTATTAACATCGCATCAAACCTACTC 237
BSNT_02504___ 298 AATTACGCCAAACTGGAAAAAGAATGTGTTGTTATCGGGGTTTCTAATCG 347
.|.||.||.|||||.||||||||||||||.||.|||||.|||||.|||||
BPUM_1406___m 238 CAATATGCAAAACTCGAAAAAGAATGTGTGGTCATCGGCGTTTCAAATCG 287
BSNT_02504___ 348 AATTGAATTGTGGAGTAAAGT-AATTTGGGAACAATACACAGAAGAGCAA 396
||||||.||||||||| |||| .||.|||||||||||.||||||||||||
BPUM_1406___m 288 AATTGAGTTGTGGAGT-AAGTCGATCTGGGAACAATATACAGAAGAGCAA 336
BSNT_02504___ 397 GAAGATTCATTTGCTGAAATTGCTGAAAACATGATTGGGTTTGATATATA 446
||||||||.|||||||||||||||||||||||||||||.|||||||||||
BPUM_1406___m 337 GAAGATTCTTTTGCTGAAATTGCTGAAAACATGATTGGATTTGATATATA 386
BSNT_02504___ 447 A 447
|
BPUM_1406___m 387 A 387
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