Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02498 and BPUM_1400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence dna-align/BSNT_02498___ylbN.1.24716.seq
# -bsequence dna-align/BPUM_1400___ylbN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02498___ylbN-BPUM_1400___ylbN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02498___ylbN-BPUM_1400___ylbN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02498___ylbN
# 2: BPUM_1400___ylbN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 528
# Identity: 394/528 (74.6%)
# Similarity: 394/528 (74.6%)
# Gaps: 18/528 ( 3.4%)
# Score: 1402.0
#
#
#=======================================
BSNT_02498___ 1 ATGAAATGGACGATTTATCAGCTGCATC-AAATGCCAAAACAAAGTTTTG 49
.||||||||||..||||||||.|.|||| |||.||.|||| |.||.||.|
BPUM_1400___y 1 TTGAAATGGACAGTTTATCAGTTACATCAAAAAGCTAAAA-ACAGCTTCG 49
BSNT_02498___ 50 AGTTTGATGAAACAGTTGAGTTAAATGAGCTGACAAAGCTGAATTCTGAC 99
|.|||.||||.||.|||||.||||||||.||.||.|..||..||||.||.
BPUM_1400___y 50 ATTTTCATGAGACGGTTGACTTAAATGAACTTACTAGCCTTCATTCAGAT 99
BSNT_02498___ 100 ATTCGCCGCATTTCTCCCGTCCGGGTGAAGGGCA---GAGCGGATATCAA 146
||.||.||||||||.||.||...||||||.||.| |||.| |||.|
BPUM_1400___y 100 ATACGTCGCATTTCACCAGTAGAGGTGAAAGGGACTGGAGTG---ATCGA 146
BSNT_02498___ 147 ATCCAAACAGGTTTCGTTTGATTTTACAATTTCAGGCGAAATGATTTTGC 196
|||.||.||.||..|.||||||||.||.||..||||.|||||||..||||
BPUM_1400___y 147 ATCAAAGCAAGTCGCATTTGATTTAACCATCACAGGTGAAATGACATTGC 196
BSNT_02498___ 197 CATGCTCAAGAACACTCGTTGATGTCCCGTATCCATTTGAAATTTCAACA 246
|.||.||||||||.||.||||||||....||||||||||..||||||||.
BPUM_1400___y 197 CTTGTTCAAGAACGCTTGTTGATGTAAATTATCCATTTGCGATTTCAACG 246
BSNT_02498___ 247 AAAGAACTGTTTATATTTCATCACACGGATGATATAGAAGATGATGACGT 296
||||||||.|||.||.|||||.|.||.||.||.|||||||||||.|||||
BPUM_1400___y 247 AAAGAACTATTTGTACTTCATAAGACAGACGACATAGAAGATGAAGACGT 296
BSNT_02498___ 297 TCATATTGTTGAGGACGATACTATCGACTTAACTCCGATCGTGAAAGAAG 346
|..||||||.||.|||||.|..|||||||||||.||..|.||.||.||||
BPUM_1400___y 297 TTCTATTGTAGAAGACGACATCATCGACTTAACGCCTTTAGTCAAGGAAG 346
BSNT_02498___ 347 AAATTCTTTTAGAAATCCCTATGCAAATCTTTTG---TGAATCTGAACAA 393
||||||||.|.|||.|.||.|||||||||||||| |.||.||| |.
BPUM_1400___y 347 AAATTCTTCTTGAAGTGCCGATGCAAATCTTTTGCGATCAAACTG---AC 393
BSNT_02498___ 394 GAAAAAGGAGCTGCTCCTCAAGAAGGAAAGGATTGGCAAGTCATTTCGGA 443
|.||||||.|||||.||.||||||||.||.||.|||...|||||||||||
BPUM_1400___y 394 GTAAAAGGTGCTGCACCACAAGAAGGGAATGACTGGGCGGTCATTTCGGA 443
BSNT_02498___ 444 AGAAG-ACAAGAAGAATCAAGTTGATCCGAGACTTGCAGCCCTTGAA-AA 491
|||.| |||..|| ||.|.|.|||||||..| .|||.|...|||||| ||
BPUM_1400___y 444 AGATGCACATCAA-AACCGAATTGATCCTCG-TTTGGAAGGCTTGAAGAA 491
BSNT_02498___ 492 GCTCTTAAAACAAGATGATGAATCTTAA 519
|||||||.||.||.||.|||||||||||
BPUM_1400___y 492 GCTCTTAGAAGAAAATAATGAATCTTAA 519
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