Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02466 and BPUM_1375

See Amino acid alignment / Visit BSNT_02466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_02466___ylaN.1.24716.seq
#    -bsequence dna-align/BPUM_1375___ylaN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02466___ylaN-BPUM_1375___ylaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02466___ylaN-BPUM_1375___ylaN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02466___ylaN
# 2: BPUM_1375___ylaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     221/285 (77.5%)
# Similarity:   221/285 (77.5%)
# Gaps:           6/285 ( 2.1%)
# Score: 832.0
# 
#
#=======================================

BSNT_02466___      1 TTGGCTTCAGAGATGATAGTTGACCATCGGCAAAAAGCTTTTGAACTCTT     50
                     |||||.|||||.||..||||.||.||||||||||||||..|.|...|.||
BPUM_1375___y      1 TTGGCGTCAGAAATTTTAGTCGATCATCGGCAAAAAGCACTGGCTTTATT     50

BSNT_02466___     51 AAAAGTGGACGCTGAGAAGATTTTGAAGCTGATCCGAGTACAAATGGATA    100
                     ||||.||||.||.||.||.|||||.||..||||||.|||.||||||||.|
BPUM_1375___y     51 AAAATTGGATGCAGATAAAATTTTAAAATTGATCCAAGTGCAAATGGACA    100

BSNT_02466___    101 ACTTAACGATGCCTCAATGTCCTCTATATGAAGAGGTTTTAGATACTCAA    150
                     |||||||||||||.|||||||||||.||||||||||||||||||||||||
BPUM_1375___y    101 ACTTAACGATGCCGCAATGTCCTCTTTATGAAGAGGTTTTAGATACTCAA    150

BSNT_02466___    151 ATGTTCGGGCTTTCGAGGGAAATCGATTTTGCTGTCCGCCTGGGATTGGT    200
                     ||||||||..|.|||||.|||||.|||||.||||||||.||.|||||.||
BPUM_1375___y    151 ATGTTCGGATTATCGAGAGAAATTGATTTCGCTGTCCGGCTTGGATTAGT    200

BSNT_02466___    201 TGATGAAAAAGACGGTAAAGACCT--TTTATACACATTG-GAACGCGAAT    247
                     ||||.||.|.||.|||||..|.||  |..|||.|| ||| ||  |.||..
BPUM_1375___y    201 TGATCAACATGAAGGTAAGAAACTACTCGATAAAC-TTGAGA--GAGAGC    247

BSNT_02466___    248 TGTCTGCTTTACATGACGCGTTTACAGCTAAATAA    282
                     |.||.||..|.|||||.|||||.|||...||||||
BPUM_1375___y    248 TTTCCGCACTTCATGATGCGTTCACAAAAAAATAA    282


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