Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02461 and BPUM_1370
See
Amino acid alignment /
Visit
BSNT_02461 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_02461___ylaI.1.24716.seq
# -bsequence dna-align/BPUM_1370___ylaI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02461___ylaI-BPUM_1370___ylaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02461___ylaI-BPUM_1370___ylaI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02461___ylaI
# 2: BPUM_1370___ylaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 159/239 (66.5%)
# Similarity: 159/239 (66.5%)
# Gaps: 37/239 (15.5%)
# Score: 501.5
#
#
#=======================================
BSNT_02461___ 1 ATGATGAGGGTCAAATGTTCTATT-TGCGATAAAATTGAAACAATTGATG 49
|||||.||.||.||.|| ||| ||.||.||..|||||||.|||||||
BPUM_1370___y 1 ---ATGAGAGTGAAGTGCTC-ATTATGTGAGAAGCTTGAAACCATTGATG 46
BSNT_02461___ 50 ATGATACCCTGATCGCGAAACGGCTTCGAAACCGCCCGATCCATACATAT 99
|||||||.||..|.||.||||||.|..||||.||.|||||.|||||||||
BPUM_1370___y 47 ATGATACACTCGTTGCTAAACGGTTAAGAAATCGACCGATTCATACATAT 96
BSNT_02461___ 100 ATGTGCCAGGAATGCCACGATCGGATTGCCAA---AAAAACAGAGGAACG 146
||||||.|.||.||.||.||.||.||| || |||.|||||.|.|||
BPUM_1370___y 97 ATGTGCGATGACTGTCAGGAACGTATT---AAAGTAAAGACAGAAGCACG 143
BSNT_02461___ 147 GCTGAAAACGGGAAAATT---TACTTT-TCA----CCCGGGAC------- 181
..|.||.||.||.|.||| | |||| ||| ||.|.|||
BPUM_1370___y 144 CATCAAGACTGGCAGATTCTCT-CTTTATCAAGATCCTGCGACGAAAGAG 192
BSNT_02461___ 182 ----AGCAGAAAAAAG---AAAAAGTCAAAAA---ATAA 210
||.||||||||| ||||||...|||| ||||
BPUM_1370___y 193 AAAAAGAAGAAAAAAGGAAAAAAAGAACAAAAGACATAA 231
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.