Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02434 and BPUM_1359
See
Amino acid alignment /
Visit
BSNT_02434 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence dna-align/BSNT_02434___slp.1.24716.seq
# -bsequence dna-align/BPUM_1359___slp.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02434___slp-BPUM_1359___slp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02434___slp-BPUM_1359___slp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02434___slp
# 2: BPUM_1359___slp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 418
# Identity: 225/418 (53.8%)
# Similarity: 225/418 (53.8%)
# Gaps: 107/418 (25.6%)
# Score: 509.0
#
#
#=======================================
BSNT_02434___ 1 ATGCGATATCGCGCGGTA-----TTCCCCATGCTGATAATAGTATTTGCT 45
||||..|.| ||| || ||||||.||.|..||||
BPUM_1359___s 1 ATGCTCTTT------GTACTTAGTT---CATGCTCATTAGCGTAT----- 36
BSNT_02434___ 46 TTATCGGGCTGTACGCTTTCCACCATCAATCCGATGAAAAAAAGCCGGAT 95
||||..||| ||..||.|.||
BPUM_1359___s 37 ------------------------ATCATACCG-----AATCAGACAGA- 56
BSNT_02434___ 96 TGACAA--CATTCATCATACACA-------AATCCTGTTTTTTTCTGATG 136
.||| ||.|||| ||.||.| |||.||.||||||.|.||||
BPUM_1359___s 57 --CCAAGTCAGTCAT-ATTCAAAAACCAAGAATTCTCTTTTTTACAGATG 103
BSNT_02434___ 137 -AGAACCAAA--TAGACCAGGAAGCGCCTTATTACGATGCACTGCTTGAT 183
||| ||| |.||..|.|||...||||||||.||||||.|.||.|||
BPUM_1359___s 104 CAGA---AAATCTTGATAAAGAAAGTCCTTATTATGATGCAGTCCTCGAT 150
BSNT_02434___ 184 TTAGAAAAAGATTATCCCGAGCAAATAGAT----AAAATGAAGGTCTATG 229
|||.|.||.||.|| |||| |||.|.|| ||||||| .||
BPUM_1359___s 151 TTAAAGAATGAATA-CCCG---AAAGAAATGTCAAAAATGA------TTG 190
BSNT_02434___ 230 ATAAAAAAG------AAGGCTGGGAAGATGAGATTGA--AACTGTCC--C 269
..|||.||| ||||||||.||.||||..|.|| ||.|| || |
BPUM_1359___s 191 TGAAAGAAGATCTTAAAGGCTGGAAAAATGAAGTAGACGAATTG-CCGGC 239
BSNT_02434___ 270 TACCCTTATGGTTGTTGATCAGCGCCATGTCGTGGTGAAAATCGAGGGAT 319
|| ||.|..||||..||.|.....|.|||.|.|||||..|.||.|||.
BPUM_1359___s 240 TA---TTTTACTTGTAAATAATGAAAAAGTCATTGTGAAGGTTGAAGGAA 286
BSNT_02434___ 320 GTGTGAAAAAGAAAGAAGACAT--------CATTAAACCA----TTACAG 357
.|||.|..|..|||||.||.|| |||||..||| |||.|.
BPUM_1359___s 287 ATGTCAGTAGTAAAGAGGATATTTTATCGCCATTATGCCACGCTTTAGAC 336
BSNT_02434___ 358 CATGTGCTGTCAAAATAA 375
|..|||....||||.|||
BPUM_1359___s 337 CGCGTGAATACAAATTAA 354
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.