Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02413 and BPUM_1344

See Amino acid alignment / Visit BSNT_02413 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence dna-align/BSNT_02413___abh.1.24716.seq
#    -bsequence dna-align/BPUM_1344___abh.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02413___abh-BPUM_1344___abh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02413___abh-BPUM_1344___abh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02413___abh
# 2: BPUM_1344___abh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     206/279 (73.8%)
# Similarity:   206/279 (73.8%)
# Gaps:           0/279 ( 0.0%)
# Score: 738.0
# 
#
#=======================================

BSNT_02413___      1 ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGT     50
                     .|||||||.||.||.||.||.|||||||||||.|||.||||.||.|||||
BPUM_1344___a      1 TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGT     50

BSNT_02413___     51 CATGCCGATTGAGTTGAGACGGGCATTGGATATTGCCATAAAAGACAGCA    100
                     .|||||.||.||.||.|||.|.|||.|.||||||||.||.||||||||.|
BPUM_1344___a     51 GATGCCAATCGAATTAAGAAGAGCACTTGATATTGCTATTAAAGACAGTA    100

BSNT_02413___    101 TTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCT    150
                     |.||.||||||.|.||.||.|||||||||.||||||||||.|||.|.||.
BPUM_1344___a    101 TGGAATTTTTTATAGATGGGGATAAAATTGTCTTGAAAAAATACCAGCCA    150

BSNT_02413___    151 CATGGCGTTTGTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATA    200
                     .|.||.|||||..|.||||||||.||.||.||.|||||.||..|.||.||
BPUM_1344___a    151 GAAGGTGTTTGCCTCATGACTGGTGAGATTACATCAGAGAACCATGATTA    200

BSNT_02413___    201 CGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAGCTGCTTCTCG    250
                     .||.||.|||.|||||||..|||||.||||.||.|||.|.||.||..|..
BPUM_1344___a    201 TGGTAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAACTACTGTTAA    250

BSNT_02413___    251 AAGAAATTCAAGCCGCTTTAAAAGAATAA    279
                     |||||.||||||..|||.|..|..|.|||
BPUM_1344___a    251 AAGAACTTCAAGAAGCTCTTCAGCAGTAA    279


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