Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02413 and BPUM_1344
See
Amino acid alignment /
Visit
BSNT_02413 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:53
# Commandline: needle
# -asequence dna-align/BSNT_02413___abh.1.24716.seq
# -bsequence dna-align/BPUM_1344___abh.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02413___abh-BPUM_1344___abh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02413___abh-BPUM_1344___abh.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02413___abh
# 2: BPUM_1344___abh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity: 206/279 (73.8%)
# Similarity: 206/279 (73.8%)
# Gaps: 0/279 ( 0.0%)
# Score: 738.0
#
#
#=======================================
BSNT_02413___ 1 ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGT 50
.|||||||.||.||.||.||.|||||||||||.|||.||||.||.|||||
BPUM_1344___a 1 TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGT 50
BSNT_02413___ 51 CATGCCGATTGAGTTGAGACGGGCATTGGATATTGCCATAAAAGACAGCA 100
.|||||.||.||.||.|||.|.|||.|.||||||||.||.||||||||.|
BPUM_1344___a 51 GATGCCAATCGAATTAAGAAGAGCACTTGATATTGCTATTAAAGACAGTA 100
BSNT_02413___ 101 TTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCT 150
|.||.||||||.|.||.||.|||||||||.||||||||||.|||.|.||.
BPUM_1344___a 101 TGGAATTTTTTATAGATGGGGATAAAATTGTCTTGAAAAAATACCAGCCA 150
BSNT_02413___ 151 CATGGCGTTTGTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATA 200
.|.||.|||||..|.||||||||.||.||.||.|||||.||..|.||.||
BPUM_1344___a 151 GAAGGTGTTTGCCTCATGACTGGTGAGATTACATCAGAGAACCATGATTA 200
BSNT_02413___ 201 CGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAGCTGCTTCTCG 250
.||.||.|||.|||||||..|||||.||||.||.|||.|.||.||..|..
BPUM_1344___a 201 TGGTAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAACTACTGTTAA 250
BSNT_02413___ 251 AAGAAATTCAAGCCGCTTTAAAAGAATAA 279
|||||.||||||..|||.|..|..|.|||
BPUM_1344___a 251 AAGAACTTCAAGAAGCTCTTCAGCAGTAA 279
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.