Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02398 and BPUM_1332
See
Amino acid alignment /
Visit
BSNT_02398 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_02398___yknY.1.24716.seq
# -bsequence dna-align/BPUM_1332___yknY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02398___yknY-BPUM_1332___yknY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02398___yknY-BPUM_1332___yknY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02398___yknY
# 2: BPUM_1332___yknY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 737
# Identity: 488/737 (66.2%)
# Similarity: 488/737 (66.2%)
# Gaps: 79/737 (10.7%)
# Score: 1535.5
#
#
#=======================================
BSNT_02398___ 1 ATGATTCAGCTTTCTAATGTGCGAAAAAGCTATCAGATCGGAAAGGAAAC 50
||||||||||||||.||.|||..||||||||||.||.|.|...|.|||.|
BPUM_1332___y 1 ATGATTCAGCTTTCAAACGTGACAAAAAGCTATGAGGTTGCCCAAGAAGC 50
BSNT_02398___ 51 GTTTGATGTTCTCCATT-----CTATTGATTTGGACATTCATCAAGGTGA 95
.|||||||| ||| ..||.|||.|.|.||||.|..||||.||
BPUM_1332___y 51 ATTTGATGT-----ATTAAGTGAGATCGATCTTGTCATTGAAAAAGGCGA 95
BSNT_02398___ 96 ATATGTCTCGATTATGGGGCCGTCAGGATCAGGAAAATCGACGATCATGA 145
.|||.|.||.||||||||.|||||.||.||.||||||||||||.|.||||
BPUM_1332___y 96 GTATATGTCCATTATGGGCCCGTCTGGCTCTGGAAAATCGACGTTAATGA 145
BSNT_02398___ 146 ATATTATCGGCTGTCTTGATCGGCCGACTTCCGGTAC-ATATCAATTGGA 194
||||.||.||||||.|.||.|||||.|||.|.|| || ||||||.||..|
BPUM_1332___y 146 ATATCATTGGCTGTTTAGACCGGCCAACTACAGG-ACAATATCATTTTCA 194
BSNT_02398___ 195 CGGCGAAGACA--TTTCTTCATATAAAGATAAAGAACTGGCGGCAGTCCG 242
.| |||||.| |.||..||...||.|||.||||.||.||.|...|.||
BPUM_1332___y 195 AG--GAAGAGAGCTGTCAGCAGCAAAGGATCAAGACCTCGCAGTGATTCG 242
BSNT_02398___ 243 TAACCGGTCCATCGGTTTTGTGTTTCAGCAATTTCAGCTTCTT-CCGCGG 291
.||.|..|.|||.||.|||||.|||||||||||||| |||.|| |||.||
BPUM_1332___y 243 AAATCAATTCATTGGATTTGTCTTTCAGCAATTTCA-CTTGTTGCCGAGG 291
BSNT_02398___ 292 CTGAACGCAAAAAAAAATGTCGAGCTGCCGATGATTTATTCCGGGAT-AG 340
.|.||.||.|.....|||||.|||||.|||||||||||..||||.|| ||
BPUM_1332___y 292 TTAAATGCGAGGCGTAATGTTGAGCTTCCGATGATTTACGCCGGTATCAG 341
BSNT_02398___ 341 GCAAAAAGGAACGTCAAGAGCGGGCTGAGAGAGCATTGGAAAAGGTCGGG 390
.| ||||||||.|..||||.||.||.||||..|||.|.||||||||.||.
BPUM_1332___y 342 TC-AAAAGGAAAGAAAAGAACGCGCAGAGATGGCACTTGAAAAGGTTGGT 390
BSNT_02398___ 391 TTAGCAAATCGAATGCTCCACATGCCCAACGAGCTGTCTGGCGGGCAGAA 440
||.|||.|.||||||...||.|||||.|..|||.||||.||.|||||.||
BPUM_1332___y 391 TTGGCAGACCGAATGAAACATATGCCGAGTGAGTTGTCGGGAGGGCAAAA 440
BSNT_02398___ 441 GCAGCGGGTGGCGATTGCGAGGGCGATCGTGAATGAGCCCAAATTGATTT 490
|||..|||||||.|||||..|.||.||.||.|||.||||.||..|.||.|
BPUM_1332___y 441 GCAAAGGGTGGCAATTGCTCGTGCAATTGTCAATAAGCCGAAGCTTATCT 490
BSNT_02398___ 491 TAGCTGATGAACCGACCGGCGCGCTAGATACGAAAACAAGCGAGGCGATT 540
||||.|||||||||||.|||||.||.||..|.|||||||||....|.||.
BPUM_1332___y 491 TAGCAGATGAACCGACAGGCGCTCTTGACTCAAAAACAAGCTTCTCAATC 540
BSNT_02398___ 541 ATGGATCAGTTTAC--AGCATTAAATGCCGAGGGAACGACAATCGTTCTG 588
|||||.|||||||| || ||.||||..||.||.||.||.||.||.||.
BPUM_1332___y 541 ATGGAACAGTTTACGAAG--TTGAATGAGGAAGGGACAACGATTGTACTT 588
BSNT_02398___ 589 GTTACTCACGAGCCTGAAGTAGCAGATTGC----ACGAATCGGATCGTCA 634
|||||.||.||....|||.|||| ||| ||.|||||.|..|||.
BPUM_1332___y 589 GTTACCCATGAAGAAGAAATAGC----TGCATATACAAATCGAACGGTCG 634
BSNT_02398___ 635 TGGTGCGTGACGGA----------AACATTG-TTCCTGCCAGCTCCGGAC 673
|.||..|.||.||| ||.||.| || |||
BPUM_1332___y 635 TTGTAAGAGATGGACGACTCGTTGAAGATAGATT-------------GAC 671
BSNT_02398___ 674 A-AAGGAGTGTGGGA------GAATGA---------- 693
| ||| |||| ||||||
BPUM_1332___y 672 ACAAG------GGGACGCTATGAATGAAACTCTTTGA 702
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.