Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02390 and BPUM_1328

See Amino acid alignment / Visit BSNT_02390 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence dna-align/BSNT_02390___moaD.1.24716.seq
#    -bsequence dna-align/BPUM_1328___moaD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02390___moaD-BPUM_1328___moaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02390___moaD-BPUM_1328___moaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02390___moaD
# 2: BPUM_1328___moaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     151/260 (58.1%)
# Similarity:   151/260 (58.1%)
# Gaps:          52/260 (20.0%)
# Score: 377.5
# 
#
#=======================================

BSNT_02390___      1 ATGATTAAAATTCTTTTATTTGCAGGACTGGCTGAACAGGCCGGTACACA     50
                     .||||||...|..|.||.||.||.||.||.|||||..|||||||||.|||
BPUM_1328___m      1 TTGATTAGTGTATTATTGTTCGCCGGCCTTGCTGATAAGGCCGGTAAACA     50

BSNT_02390___     51 AGCA-------ATAGAAATAGATGTGGAACAAGCAACCACAGATGAAATA     93
                     | ||       ||..|||.||||      |||.||||....|||||.||.
BPUM_1328___m     51 A-CAAATCATCATTCAAAAAGAT------CAAACAACGGTTGATGAGATT     93

BSNT_02390___     94 AAAGCGAGTCTAAAAGAACA------ATACGGTCTTGAATCTATTG----    133
                     |||      .||.||..|||      |||.|||.||||   |..||    
BPUM_1328___m     94 AAA------TTAGAATTACAGGAGGTATATGGTGTTGA---TGCTGCACA    134

BSNT_02390___    134 ATACGGCT-ATGATTGCCGTTAACGAAAGCTAT------GTAAAAG--AA    174
                     |.|||  | |||.||||.||.||||||.|.|||      |.|||.|  .|
BPUM_1328___m    135 AAACG--TGATGGTTGCAGTCAACGAACGATATACGAGGGGAAACGCTGA    182

BSNT_02390___    175 AATACCTCTGTATCTTCGGGTGACACGGTAGCCATCATACCGCCGGTCAG    224
                     |.|.|    |||.|    ||.|||||.||.||..||||.||.||.||.||
BPUM_1328___m    183 AGTGC----GTAGC----GGGGACACTGTTGCATTCATTCCTCCTGTAAG    224

BSNT_02390___    225 CGGGGGATGA    234
                     .||.||||.|
BPUM_1328___m    225 TGGTGGATAA    234


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