Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02383 and BPUM_1324
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence dna-align/BSNT_02383___moeB.1.24716.seq
# -bsequence dna-align/BPUM_1324___moeB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02383___moeB-BPUM_1324___moeB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02383___moeB-BPUM_1324___moeB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02383___moeB
# 2: BPUM_1324___moeB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1096
# Identity: 679/1096 (62.0%)
# Similarity: 679/1096 (62.0%)
# Gaps: 155/1096 (14.1%)
# Score: 1918.0
#
#
#=======================================
BSNT_02383___ 1 ATGGAGGAACGTTATTCACGGCAAATCAGATTTAAGCAAATTGGGGAAGA 50
.||.|.||.||.||||||.|.||||||...||....|...||||||||.|
BPUM_1324___m 1 TTGAATGATCGATATTCAAGACAAATCTTGTTCCCTCCGGTTGGGGAAAA 50
BSNT_02383___ 51 GGGCCAGAAAAGACTGGCAGACAGCCATGTGCTGATTGTCGGAGCGGGAG 100
|||.|||......||.||.|||||.|||||.||.|||||.||||||||.|
BPUM_1324___m 51 GGGTCAGCGTGCGCTTGCTGACAGTCATGTTCTAATTGTTGGAGCGGGTG 100
BSNT_02383___ 101 CGCTCGGCACTGCAGGAGCTGAAGGACTT-TCGAGAGCGGGAGTCGGTAC 149
|.||.||.||.||...|||.|||||.||| ||..|...|||| ||||.||
BPUM_1324___m 101 CACTTGGAACGGCCTCAGCAGAAGGGCTTGTCCGGTCTGGGA-TCGGCAC 149
BSNT_02383___ 150 GATTACCATTATTGACCGTGACTATGTGGAGTGGAGCAATCTTCAAA--- 196
|.|.||.||..|.||.|||||.|||||.||| |.||||||
BPUM_1324___m 150 GTTAACGATAGTAGATCGTGATTATGTAGAG--------TTTTCAAATTT 191
BSNT_02383___ 197 -----GGCAGCAGCTTTATACAGAAAGCGATGCCAAACTCCGCA----TG 237
|||||||||||||.||||||...|||||.|| .||| ||
BPUM_1324___m 192 ACAGCGGCAGCAGCTTTACACAGAACATGATGCAAA----GGCACATGTG 237
BSNT_02383___ 238 CCGAAAGCCATGGCTGCCAAAGAGCATCTATCAGCGATTAA-CAGCGAG- 285
||.|||||..|.||.||.|||.|.|.|||...||.|||.|| ||...||
BPUM_1324___m 238 CCAAAAGCAGTTGCGGCAAAAAAACGTCTCCAAGAGATCAATCATGAAGT 287
BSNT_02383___ 286 ----ATACAT------ATTGAGGCGTATGTTACCGAAGGAACAGCCGAAA 325
|||.|| |||||.| ||| |||..|
BPUM_1324___m 288 AACCATAGATGCCCTAATTGAAG---ATG------------CAGGTG--- 319
BSNT_02383___ 326 CGCTTGAG---------CCGCTGATTGAAAAAGCAGATGTCGTGATCGAC 366
||||| |||.|..||.||||.|||.||.|.||.||.||.
BPUM_1324___m 320 ---TTGAGCTGTTAAGACCGTTATTTCAAAACGCAAATATAGTCATTGAT 366
BSNT_02383___ 367 GCGACAGATAATTTTGAAACCCGCATGCTGATAAACGATCTTGCCCAGAA 416
|||||.||||||||.||.||..|.|||.|.||.||.|||.|..|.|||.|
BPUM_1324___m 367 GCGACGGATAATTTCGAGACGAGAATGATCATGAATGATTTATCGCAGGA 416
BSNT_02383___ 417 AACAAAGACACCTTGGGTCTATGGCGCCTGTGTAAGCAGCCAGGGAATGT 466
|||.|||||.||||||.|.||||||||.|||||||||||.|||||.||||
BPUM_1324___m 417 AACGAAGACGCCTTGGATATATGGCGCTTGTGTAAGCAGTCAGGGGATGT 466
BSNT_02383___ 467 TCATGACTGTCATTCCCGGA-GAAACCCCTTGTCTGTCTTGTTTGTTT-G 514
..|||||||| .||.||||| .||||.||.|||.|.||.|||.|.||| .
BPUM_1324___m 467 ATATGACTGT-TTTGCCGGATAAAACGCCGTGTTTATCGTGTGTCTTTAC 515
BSNT_02383___ 515 AGCAAATTCCTGTCGGCGGGGCGACGTGTGATACTGCCGGCATTATTCCG 564
|| ||||.|||||.|||||...||||||||||||.||.||.||||||.|.
BPUM_1324___m 516 AG-AAATGCCTGTTGGCGGCTTGACGTGTGATACAGCGGGGATTATTTCT 564
BSNT_02383___ 565 CCTGCTGTGCATATCGTTTCAGCATATCAGCAGGCTGAGGCATTAAAGCT 614
||.||.||.||.||.|||||.||.||||||||..|.|||||..||||...
BPUM_1324___m 565 CCAGCAGTTCAGATGGTTTCTGCTTATCAGCAAACAGAGGCGCTAAAATA 614
BSNT_02383___ 615 GTTAACCGGCCAAAAAGAAGCAATACAGCGGGGTTTTGTGACATTTGATG 664
.|||||.||.||..||||...|||..|.|||...|||||.|||||||||.
BPUM_1324___m 615 TTTAACAGGACATGAAGATCAAATTGAACGGAAATTTGTCACATTTGATC 664
BSNT_02383___ 665 TCTGGAA---CAATTCGCATATGAA---GATTAACGTTAATCAT-GTACG 707
|.|||.| .|..||| |.|.|| |||| |...|||| .||.|
BPUM_1324___m 665 TTTGGCAGGCGACCTCG--TTTAAAATGGATT----TGTCTCATACTAAG 708
BSNT_02383___ 708 CCGTGAGGAATGCCCATCTTGCGG---AGCTAATGCGGTA--TATCCTTA 752
|.| .||||.||.||||||||||| ||.|| |.| ||||||||
BPUM_1324___m 709 CAG-AAGGACTGTCCATCTTGCGGCAAAGATA-----GAACCTATCCTTA 752
BSNT_02383___ 753 TCTTCAGGATTGGAACACACCAAAAGCTGCTGTACTATGCGGCCGTGACA 802
|.|.||.|| |.|||..| .||||.|..|..|.||||||||.||.||.|
BPUM_1324___m 753 TTTACACGA--GCAACGTA-AAAAAACGACGATTCTATGCGGGCGGGATA 799
BSNT_02383___ 803 CAGTGCAGG-------TAAGG--TCAG--AATCATTAAAAAGAATCCCGA 841
|.||.||.| ||||| |.|| |||| ||
BPUM_1324___m 800 CCGTACAAGTTGTATCTAAGGATTTAGCTAATC--TA------------- 834
BSNT_02383___ 842 AACAGGAGCTCATT-----------AAG--CGGCTGAAAACAATCGGCAA 878
||||| ||| ||||||..|.|.||..|..|
BPUM_1324___m 835 ---------TCATTTCAGCATGTGAAAGAACGGCTGTCATCTATTTGTGA 875
BSNT_02383___ 879 GGTCGAGGCTAATGCGTTTTTGCTGCATATTTTTTACGAGGATTTCA--- 925
|.|.||.|..||||..||.||..|.|||.|....||.||| |||
BPUM_1324___m 876 GATGGAAGTGAATGACTTCTTAATCCATGTCCGCTATGAG----TCATAT 921
BSNT_02383___ 926 -GAATTGTCATTTTCAGTGACGGACGGGCACTGGTGCATGGAACAAATGA 974
|.|||||||||||||..|..|||||.|||.|..|.|||||.||||||||
BPUM_1324___m 922 CGTATTGTCATTTTCAAAGGTGGACGTGCATTAATTCATGGGACAAATGA 971
BSNT_02383___ 975 TGTGAAAGAAGCCAACTCCGTGTTGGCAAGAGTGATTGGACTGTAA 1020
||..||||.||||||.||..|..|.||||.|.||.|.||..|.||.
BPUM_1324___m 972 TGAAAAAGCAGCCAATTCATTACTAGCAAAACTGCTAGGGATATAG 1017
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