Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02381 and BPUM_1323
See
Amino acid alignment /
Visit
BSNT_02381 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence dna-align/BSNT_02381___mobA.1.24716.seq
# -bsequence dna-align/BPUM_1323___mobA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02381___mobA-BPUM_1323___mobA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02381___mobA-BPUM_1323___mobA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02381___mobA
# 2: BPUM_1323___mobA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 672
# Identity: 370/672 (55.1%)
# Similarity: 370/672 (55.1%)
# Gaps: 162/672 (24.1%)
# Score: 803.0
#
#
#=======================================
BSNT_02381___ 1 ATGAAGCAT-GTAAACGTACTGTTGGCAGGGGGAGCCTCACGTCGCTTTG 49
|||.| |.| ||.||.||..||||.||.||.|||||.||..|.||.||||
BPUM_1323___m 1 ATGGA-CGTAGTCAATGTCATGTTAGCTGGAGGAGCATCGAGACGTTTTG 49
BSNT_02381___ 50 GAGAACCGAAGGC--GTT-----TGTCAAATGGAAGGGCAGGATGCTTTA 92
||||.||.||||| ||| |.|||| ||||...|| ||.||
BPUM_1323___m 50 GAGAGCCAAAGGCAAGTTATATGTATCAA--GGAAAACCA-----CTATA 92
BSNT_02381___ 93 CGA--ATGCGCTAAAGAGGCACTTGGAGA-ACAAACGGTTATCATCAGCC 139
.|| |||.|..|||...||..|||.|.| |||.|||||.||||||||||
BPUM_1323___m 93 TGAGCATGTGAAAAAACAGCTTTTGAAAAGACAGACGGTCATCATCAGCC 142
BSNT_02381___ 140 GTCCCGAATTTATTGATAGA----TTTC-AAGAAAACGGTGAAAATGAAG 184
.|||...|.||.| || |||| ||||||..||||||...||.|
BPUM_1323___m 143 ATCCATCACTTCT-----GACCTTTTTCAAAGAAAGAGGTGAACGAGATG 187
BSNT_02381___ 185 TGTATCAAGATGCTGAGCCATTTCAAGGCATG---------GGGCCATTG 225
|||....|||||.|||.| ||| || |||||..|.
BPUM_1323___m 188 TGTGGTTAGATGATGAAC-------AGG--TGCGCGGATATGGGCCGCTT 228
BSNT_02381___ 226 GCTGGTATATATACCGCTTTTAAAAAGACAGACG----GTGATCTTTA-- 269
||.|||||.|||||.||..|..||||.|.|||.| .||.|.||||
BPUM_1323___m 229 GCAGGTATGTATACGGCGATGCAAAACAAAGAAGCAGCATGGTATTTAGT 278
BSNT_02381___ 270 TACTGTTCTTTCCTGTGACACACCGCTGATACAAAGAAGGACGA-TGCTG 318
.||.| |.|||||||..||..|.|||| |.|||..|| .||.|
BPUM_1323___m 279 GACGG------CATGTGACATGCCTTTCATAC---GGAGGGAGACCGCCG 319
BSNT_02381___ 319 GAGCTCAAACGTCTGATGACTGCCGGT-GCGGACGCGGTAGTCCCAAT-- 365
.|||...|.||||..|| .|| |||..|.| ||||.|.||||
BPUM_1323___m 320 AAGCATTATCGTCCTAT-------TGTAGCGAGCAC-GTAGACGCAATTA 361
BSNT_02381___ 366 ---------TTCAGACGGACA-AGTGCAGCCATTGATTGCGATTTACCAC 405
|||| ||.|| |.|.|||||.||..|||||.||||.|||
BPUM_1323___m 362 TCCCGCTTGTTCA---GGGCAGATTACAGCCTTTATTTGCGCTTTATCAC 408
BSNT_02381___ 406 AAACG-TATCATGCCAGTTCTATACGATCAGCTTTCTGAGAAGAGGTTGA 454
.|.|| |.|| ||||.| |||| .||| ||.|..|.|.|| ||
BPUM_1323___m 409 CACCGCTGTC-TGCCGG--CTAT-TGAT--GCGTGTTTAAAA------GA 446
BSNT_02381___ 455 GAA-----TATC------AGATTTATTAGGCAGAA--TTTCGGTTTGTTA 491
||| ||.| |||||||.|| ||.|| |...||||.||..
BPUM_1323___m 447 GAACCAATTAGCCATGAAAGATTTAATA--CAAAAGCTAAAGGTTCGTAT 494
BSNT_02381___ 492 CGT---ACAGG-----CTGAAAATATCGGAGCAAACCCGGCAGAGTTTAT 533
||| |.||| |||||...|.|| .||||| ||.|||..
BPUM_1323___m 495 CGTCTCAGAGGAGGAACTGAACGCAACG--CCAAAC------GAATTTCG 536
BSNT_02381___ 534 CAACATTAATACACGTGATGATTTTAGCTGTTTGGAAGAAAAATCGAACT 583
.||.||.||||.|.|..|.|| ||||.||| ||||
BPUM_1323___m 537 AAATATCAATAAAAGAAACGA-TTTACCTG---------AAAA------- 569
BSNT_02381___ 584 CCCTCAAGCGGGACTGA----- 600
|||.| |||
BPUM_1323___m 570 --------CGGTA-TGATATGA 582
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.