Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02373 and BPUM_1319

See Amino acid alignment / Visit BSNT_02373 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:51
# Commandline: needle
#    -asequence dna-align/BSNT_02373___ykuU.1.24716.seq
#    -bsequence dna-align/BPUM_1319___ykuU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02373___ykuU-BPUM_1319___ykuU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02373___ykuU-BPUM_1319___ykuU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02373___ykuU
# 2: BPUM_1319___ykuU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity:     445/543 (82.0%)
# Similarity:   445/543 (82.0%)
# Gaps:           0/543 ( 0.0%)
# Score: 1833.0
# 
#
#=======================================

BSNT_02373___      1 ATGGCAGAACGTATGGTAGGTAAACAAGCTCCTCGTTTTGAAATGGAAGC     50
                     ||||||||.|||.|.|||||.|||||||||||.|||||||||||||||||
BPUM_1319___y      1 ATGGCAGAGCGTTTTGTAGGAAAACAAGCTCCACGTTTTGAAATGGAAGC     50

BSNT_02373___     51 AGTCCTTGCAAGCAAAGAATTCGGCAAAGTAAGTCTTGAGGAAAACATGA    100
                     |||.|||||.|.|||.|||||.||.|||||||||||.||.||||||||||
BPUM_1319___y     51 AGTACTTGCTAACAAGGAATTTGGTAAAGTAAGTCTAGAAGAAAACATGA    100

BSNT_02373___    101 AAAACGACAAATGGACAGTGCTATTCTTCTATCCAATGGATTTCACTTTT    150
                     |.||.||||||||||||||.||.|||||||||||||||||||||||.|||
BPUM_1319___y    101 AGAATGACAAATGGACAGTTCTTTTCTTCTATCCAATGGATTTCACATTT    150

BSNT_02373___    151 GTTTGTCCCACAGAAATTACAGCAATGTCTGACCGCTATGACGAGTTCGA    200
                     ||||||||.||.|||||||||||||||...||.||.|||||.||||||||
BPUM_1319___y    151 GTTTGTCCAACTGAAATTACAGCAATGAGCGATCGTTATGATGAGTTCGA    200

BSNT_02373___    201 AGATCTTGATGCAGAAGTCATCGGGGTTTCAACTGATACCATCCATACTC    250
                     ||||.|.|||||.|||.|.||.||.||.||.||||||||.||||||||.|
BPUM_1319___y    201 AGATTTAGATGCTGAAATTATTGGTGTATCTACTGATACAATCCATACGC    250

BSNT_02373___    251 ATTTAGCTTGGATCAATACAGACCGCAAAGAAAACGGTCTTGGCCAGCTG    300
                     ||.|.|||||||||||.||||||||.|||||.||.|||.|.||..|..||
BPUM_1319___y    251 ATCTTGCTTGGATCAACACAGACCGTAAAGACAATGGTTTAGGTGAATTG    300

BSNT_02373___    301 AAATACCCGCTTGCTGCTGATACAAACCATGAGGTATCCCGGGAATATGG    350
                     |||||.|||||.|||||||||||||||||....|||||..|.|||||.||
BPUM_1319___y    301 AAATATCCGCTAGCTGCTGATACAAACCACACAGTATCTAGAGAATACGG    350

BSNT_02373___    351 CGTTTTAATCGAAGAAGAAGGTGTGGCTTTGCGCGGATTGTTTATTATTA    400
                     |||||||||.|||||||||||..|.||..|.|||||..|.||.|||||.|
BPUM_1319___y    351 CGTTTTAATTGAAGAAGAAGGAATTGCACTTCGCGGTCTATTCATTATCA    400

BSNT_02373___    401 ATCCTGAAGGGGAGCTTCAATATCAAACTGTTTTCCATAACAATATTGGG    450
                     |.||.|||||.||.||||||||||||||.||.|||||.||||||||.||.
BPUM_1319___y    401 ACCCAGAAGGCGAACTTCAATATCAAACAGTATTCCACAACAATATCGGT    450

BSNT_02373___    451 CGTGATGTTGATGAAACGCTTCGTGTTCTCCAGGCGCTGCAAACTGGCGG    500
                     ||||||||.|||||.||..|.||||||||.||.||..|.||||||||.||
BPUM_1319___y    451 CGTGATGTAGATGAGACATTACGTGTTCTTCAAGCATTACAAACTGGTGG    500

BSNT_02373___    501 ACTCTGTCCGGCTAACTGGAAACCAGGCCAAAAAACACTTTAA    543
                     |||.||.||.||.||||||||.||.||.|||||||||||||||
BPUM_1319___y    501 ACTTTGCCCAGCGAACTGGAAGCCTGGTCAAAAAACACTTTAA    543


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