Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02360 and BPUM_1309
See
Amino acid alignment /
Visit
BSNT_02360 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence dna-align/BSNT_02360___ykuL.1.24716.seq
# -bsequence dna-align/BPUM_1309___ykuL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02360___ykuL-BPUM_1309___ykuL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02360___ykuL-BPUM_1309___ykuL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02360___ykuL
# 2: BPUM_1309___ykuL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity: 320/465 (68.8%)
# Similarity: 320/465 (68.8%)
# Gaps: 42/465 ( 9.0%)
# Score: 1034.5
#
#
#=======================================
BSNT_02360___ 1 ATGATA-AGCTTACAATCAGATCAACTTCTTGAGGCAACAGT--CGGA-C 46
|||||| || .||.||.||..||||.|.||||||.||||||| |.|| |
BPUM_1309___y 1 ATGATAGAG-ATAGAACCAACTCAATTGCTTGAGTCAACAGTAGCTGAGC 49
BSNT_02360___ 47 AATTTATGATTGAGGCGGACAAAGTAGCGCACGTGCAAGTCGGAAATAAC 96
| |||||||||.||.||.|||||.||.||.||.|||.|.||||||||.
BPUM_1309___y 50 A---TATGATTGATGCAGATAAAGTGGCACATGTTCAAATTGGAAATAAT 96
BSNT_02360___ 97 CTTGAGCACGCATTATTAGTATTGACAAAAACCGGATACACTGCCATCCC 146
||||||||.||..||||.||..|.||||||||.|||||.||.||||||||
BPUM_1309___y 97 CTTGAGCATGCTCTATTGGTCCTTACAAAAACAGGATATACAGCCATCCC 146
BSNT_02360___ 147 GGTTCTGGATCCTTCCTACCGTTTACATGGCTTAATCAGGACAAATATGA 196
|||.||.||||||||.||||...|.|||||.|||||..|.||.|||||||
BPUM_1309___y 147 GGTACTAGATCCTTCTTACCACCTGCATGGGTTAATTGGAACGAATATGA 196
BSNT_02360___ 197 TCATGAACAGTATTTTTGGACTTGAGCGAATTGAGTTTGAAAAGCTTGAC 246
|.|||.|.|..||.|||||..|.||.||||||||.||.|||||.||.|||
BPUM_1309___y 197 TTATGGATAAGATATTTGGTTTAGAACGAATTGAATTCGAAAAACTGGAC 246
BSNT_02360___ 247 CAAATCACTGTTGAGGAAGTCATGCTGACCGACATTCCGCGCCTTCATAT 296
|||.|.|..||.||.||.||.|||||.||.||.||.||..|.|||.|.|.
BPUM_1309___y 247 CAACTGAAGGTAGAAGAGGTTATGCTCACTGATATCCCTAGACTTAAAAC 296
BSNT_02360___ 297 CAATGATCCGATTATG----AAGGGATTCGGCATG--GTCATTAATAACG 340
.|..||||| |.|| ||||..|| ||.| ||.|..|||||.|
BPUM_1309___y 297 GACAGATCC---TGTGCTAAAAGGTGTT---CACGCTGTAACGAATAATG 340
BSNT_02360___ 341 GATTTGTCTGTGTTGAAAATGACGAGCAGGTATTTGAAGGGATTTTTACG 390
|||||||.|||||.|.||||||.|||||.||.||||||||.||.|||||.
BPUM_1309___y 341 GATTTGTTTGTGTCGTAAATGAGGAGCAAGTCTTTGAAGGAATATTTACA 390
BSNT_02360___ 391 AGAAGAGTCGTTTTAAAG---------GAATTGAATAAGCATATACGCT- 430
.||.|.||.||.|||||| |||.|| |||.|.|||
BPUM_1309___y 391 CGACGTGTTGTATTAAAGCGCTTAAACGAAGTG-------ATACATGCTG 433
BSNT_02360___ 431 CGTTGAATAAGTAG- 444
| |||.||.| |
BPUM_1309___y 434 C---GAAAAAAT-GA 444
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.