Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02333 and BPUM_1283
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_02333___splB.1.24716.seq
# -bsequence dna-align/BPUM_1283___splB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02333___splB-BPUM_1283___splB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02333___splB-BPUM_1283___splB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02333___splB
# 2: BPUM_1283___splB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1038
# Identity: 784/1038 (75.5%)
# Similarity: 784/1038 (75.5%)
# Gaps: 18/1038 ( 1.7%)
# Score: 2910.0
#
#
#=======================================
BSNT_02333___ 1 ATGCAGAACCCATTTGTTCCGCAGCTTGTATATATAGAACCGAGGGCGCT 50
|||...||.||.|||||.||.||||||||.||.||.|||||..|.||..|
BPUM_1283___s 1 ATGATCAAACCTTTTGTACCCCAGCTTGTGTACATTGAACCACGTGCATT 50
BSNT_02333___ 51 GGAATATCCGCTAGGCCAAGAATTACAAGAAAAATTTGAGAATATGGGCA 100
.||.||.|||.||||.|.|||..|..|.|||||.||.|||..||||||.|
BPUM_1283___s 51 AGAGTACCCGTTAGGACGAGAGCTGAAGGAAAAGTTCGAGGGTATGGGGA 100
BSNT_02333___ 101 TTGAAATCAGAGAAACAACATCCCACAATCAGGTGCGTAATATTCCTGGG 150
|||||||.||||||||.||.||.||.||.||.||..|.||||||||.||.
BPUM_1283___s 101 TTGAAATAAGAGAAACGACTTCACATAACCAAGTAAGAAATATTCCGGGT 150
BSNT_02333___ 151 AAAAATCATCTT-CAGCAATATCGCAATGCGAAATCAACTTTAGTTATCG 199
||||||.| ||| ||..|.|||||.|||||.||||||||..|.||.||.|
BPUM_1283___s 151 AAAAATGA-CTTACAAAAGTATCGTAATGCAAAATCAACGCTTGTCATTG 199
BSNT_02333___ 200 GTGTCCGGAAAACATTAAAGTTTGATTCATCCAAACCCTCGGCTGAATAT 249
||||..|||||||.||.|||||.|||.|.||.|||||.|||||.||||||
BPUM_1283___s 200 GTGTGAGGAAAACGTTGAAGTTCGATACGTCTAAACCATCGGCAGAATAT 249
BSNT_02333___ 250 GCCATTCCGTTTGCAACAGGCTGCATGGGGCATTGTCATTACTGCTACCT 299
||||||||.|||||.|||||.||.|||||.|||||||||||.||||||.|
BPUM_1283___s 250 GCCATTCCATTTGCGACAGGATGTATGGGTCATTGTCATTATTGCTACTT 299
BSNT_02333___ 300 GCAAACAACCATGGGATCAAAGCCGTATATCAGAACTTATGTAAACGTCG 349
||||||.||.||||||...|||||.||.||..||||.||||||||.||.|
BPUM_1283___s 300 GCAAACGACGATGGGAAGTAAGCCATACATTCGAACCTATGTAAATGTTG 349
BSNT_02333___ 350 AAGAGATTTTGGATCAGGCAGATAAGTATATGAAGGAGCGCGCACCAGAG 399
||||.||.||.|||||.||.||..||||.|||||.|||||.||.|||||.
BPUM_1283___s 350 AAGAAATATTAGATCAAGCGGAGCAGTACATGAACGAGCGTGCGCCAGAT 399
BSNT_02333___ 400 TTCACAAGGTTCGAAGCATCATGTACGTCAGACATTGTAGGAATTGATCA 449
.|||||||.||.|||||.||.|||||||||||.|||||.||||||||.||
BPUM_1283___s 400 ATCACAAGATTTGAAGCTTCTTGTACGTCAGATATTGTCGGAATTGACCA 449
BSNT_02333___ 450 TCTGACACACACGCTGAAGCGCGCCATTGAACATTTTGGTCAAAGTGATC 499
|.||||||||||..|.||..|.||.||||||.|.||.|||||.|.|||||
BPUM_1283___s 450 TTTGACACACACATTAAAAAGAGCAATTGAATACTTCGGTCAGACTGATC 499
BSNT_02333___ 500 TCGGAAAGCTCCGATTTGTAACGAAATTTCATCATGTCGATCACCTATTA 549
|.||.|||||.||.|||||.||.||||||||||||||||||||..||.|.
BPUM_1283___s 500 TTGGTAAGCTTCGTTTTGTGACCAAATTTCATCATGTCGATCATTTACTT 549
BSNT_02333___ 550 GACGCAAAGCATAA----CGGGAAAACGAGATTCAGATTCAGTATTAATG 595
||.||||||||||| ||| ||.||||||.|.||.||.||.||||
BPUM_1283___s 550 GATGCAAAGCATAATGGCCGG----ACAAGATTCCGCTTTAGCATCAATG 595
BSNT_02333___ 596 CCGACTATGTGATTAAAAACTTTGAGCCGGGAACTTCACCTCTTGATAAG 645
|.||.|||||.||||||.|.||.||.||.||.||.|||||..|.|||.|.
BPUM_1283___s 596 CGGATTATGTCATTAAATATTTCGAACCTGGTACATCACCGTTAGATCAA 645
BSNT_02333___ 646 CGGATAGAGGCGGCAGTAAAAGTTGCAAAAGCAGGCTACCCGCTAGGCTT 695
|||||.||.|||||.||.||.|||||.||||||||.||.|||||.|||||
BPUM_1283___s 646 CGGATTGAAGCGGCTGTCAAGGTTGCGAAAGCAGGTTATCCGCTTGGCTT 695
BSNT_02333___ 696 TATTGTTGCTCCGATTTATATTCATGAAGGCTGGGAAGAAGGATACAGAC 745
||||.||||.||.|||||.||.||.|||||||||.|.|||||.||.|.|.
BPUM_1283___s 696 TATTATTGCCCCAATTTACATCCACGAAGGCTGGCAGGAAGGGTATAAAG 745
BSNT_02333___ 746 ATCTGTTTGAAAAGCTTGATGCTGCTTTGCCGCAGGACGTTAGACATGAC 795
.|||.|||||||||||.|||||.|||.|.||..||||.||.|||||.||.
BPUM_1283___s 746 TTCTTTTTGAAAAGCTCGATGCAGCTCTTCCTGAGGATGTGAGACACGAT 795
BSNT_02333___ 796 ATAACGTTTGAATTAATTCAACACCGTTTTACAAAACCGGCCAAACGAGT 845
||.||.||||||.|.||.||.||.||||||||||||||.||.||.||.||
BPUM_1283___s 796 ATCACCTTTGAAATGATCCAGCATCGTTTTACAAAACCAGCGAAGCGTGT 845
BSNT_02333___ 846 GATAGAGAAAAATTATCCGAAGACGAAGCTCGAATTAGATGAAGAAAAGC 895
|||..|.|||||.||||||||..|.||..|.|||.|||||||||||||..
BPUM_1283___s 846 GATTCAAAAAAACTATCCGAAATCAAAATTAGAACTAGATGAAGAAAAAA 895
BSNT_02333___ 896 GCCGTTATAAATGGGGACGCTACGGGATCGGAAAATATATATATCAGAAA 945
|.||.||.||.|||||..|.||.||.||.||.||||||||.|||||.|||
BPUM_1283___s 896 GACGATACAAGTGGGGTAGATATGGAATTGGGAAATATATCTATCAAAAA 945
BSNT_02333___ 946 GATGAAGAGCATGCACTTCGAGAAGCACTTGAATCCTATATTGA----TA 991
|||||.|||||.|.|||..||.|..|..|.|||||.|||||.|| ||
BPUM_1283___s 946 GATGAGGAGCAAGAACTAAGACAGACGTTAGAATCATATATCGATCAGTA 995
BSNT_02333___ 992 CCTTTTTCCCTAACGCGAAAATTGAATATTTCACTTAA 1029
| ||.||.||.||.||||||||||||||.||||||
BPUM_1283___s 996 C----TTTCCGAATGCAAAAATTGAATATTTTACTTAA 1029
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