Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02311 and BPUM_1270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_02311.1.24716.seq
# -bsequence dna-align/BPUM_1270.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02311-BPUM_1270.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02311-BPUM_1270.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02311
# 2: BPUM_1270
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 147/189 (77.8%)
# Similarity: 147/189 (77.8%)
# Gaps: 3/189 ( 1.6%)
# Score: 568.0
#
#
#=======================================
BSNT_02311 1 GTGAAAATCGCTAAGGTTGGGAATGTCATTGAATTTAAAAACGGATTAAC 50
.||||.||.||.||..||||.|||||.||.|||||||.|||.||.|||||
BPUM_1270 1 TTGAAGATTGCAAAAATTGGAAATGTGATCGAATTTAGAAATGGTTTAAC 50
BSNT_02311 51 CGGTGTTGTTGAAAAAGTAAATGAGAATTCTGTTATCGTTGATGTGACGA 100
.|||||.|||||||||||.||.||.||.|||||.||.||.|||||.||.|
BPUM_1270 51 AGGTGTAGTTGAAAAAGTGAACGAAAACTCTGTCATTGTAGATGTCACCA 100
BSNT_02311 101 TCATGGATAACTATCGGGATCTTGAGTTAGATTCATTGACAGTTGTTAAT 150
|.|||||.||||||.|.|||.|.||..|.||||||.|.|||||.||||||
BPUM_1270 101 TTATGGACAACTATAGAGATTTAGAACTGGATTCACTAACAGTCGTTAAT 150
BSNT_02311 151 CATAAAAATTATAAGATCATCAGAGACTCC---TATTAA 186
||||||||.|||||.|||||||.||||||| .|||||
BPUM_1270 151 CATAAAAACTATAAAATCATCAAAGACTCCGTACATTAA 189
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