Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02274 and BPUM_1244
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_02274.1.24716.seq
# -bsequence dna-align/BPUM_1244.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02274-BPUM_1244.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02274-BPUM_1244.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02274
# 2: BPUM_1244
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 114/182 (62.6%)
# Similarity: 114/182 (62.6%)
# Gaps: 43/182 (23.6%)
# Score: 306.0
#
#
#=======================================
BSNT_02274 1 ATGAAGCGTAAAGCTGAAGTG---AATGAAGCCATTAAAAATAACAATAC 47
|||||..|.||||| ||.| ||||||||..|.|.||||||.|..||
BPUM_1244 1 ATGAAAAGAAAAGC---AGCGAAAAATGAAGCACTGACAAATAATATGAC 47
BSNT_02274 48 ACCTACCGAGAGCATGGACCCCAATTCAT-AT-AAG-----ACACAATAT 90
|||.||.|||||||||| || ||| || ||| |||||||.|
BPUM_1244 48 ACCGACAGAGAGCATGG----CA---CATGATCAAGGACAAACACAATTT 90
BSNT_02274 91 CATGACGACCCCAATTTTAGAG------GGGCAAACCGCAATTC-CAAAC 133
.|||| || |.|..|||| .|||||||||.||||| ||.|.
BPUM_1244 91 GATGA--AC----AATCAAGAGACCGTCAGGCAAACCGAAATTCTCATAA 134
BSNT_02274 134 AGGG---CCAGCAGGGAGG----CATG--TAA 156
|||| |.|| .|||||| |.|| |||
BPUM_1244 135 AGGGAAACAAG-GGGGAGGATCTCGTGACTAA 165
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