Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02216 and BPUM_1214

See Amino acid alignment / Visit BSNT_02216 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence dna-align/BSNT_02216___guaD.1.24716.seq
#    -bsequence dna-align/BPUM_1214___guaD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02216___guaD-BPUM_1214___guaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02216___guaD-BPUM_1214___guaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02216___guaD
# 2: BPUM_1214___guaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity:     349/483 (72.3%)
# Similarity:   349/483 (72.3%)
# Gaps:          24/483 ( 5.0%)
# Score: 1141.0
# 
#
#=======================================

BSNT_02216___      1 ATGAATCATGAAACGTTCTTAAAACGGGCTGTCACTCTCGCATGT-GAAG     49
                     ||||||||.|||...||.|||.||||.||..|...|||.||| || ||||
BPUM_1214___g      1 ATGAATCACGAAGATTTTTTACAACGCGCAATTGATCTTGCA-GTAGAAG     49

BSNT_02216___     50 GAGTGAATGCAGGAATCGGCGGGCCTTTTGGAGCCGTTATCGTGAAAGAC     99
                     ||||.|||...||.|..|||||.|||||||||||.||.||.||.||.||.
BPUM_1214___g     50 GAGTCAATAGTGGTACTGGCGGCCCTTTTGGAGCAGTCATTGTCAAGGAT     99

BSNT_02216___    100 GGAGCCATTATTGCAGAGGGACAG-AACAACGTCACAACAAGCAATGATC    148
                     |||...||||||||.|||||| || |||||.||.|||||||..|||||||
BPUM_1214___g    100 GGACAGATTATTGCTGAGGGA-AGCAACAATGTGACAACAACGAATGATC    148

BSNT_02216___    149 CGACTGCCCACGCGGAAGTCACAGCTATTCGGAAAGCCTGTAAGGTGCTA    198
                     |.||.||.||.||.|||||||||||.|||||.||.||.||..|...||| 
BPUM_1214___g    149 CAACCGCACATGCTGAAGTCACAGCCATTCGAAAGGCGTGCCAAACGCT-    197

BSNT_02216___    199 GGA--GCATACCAGCTTGATGACTGCATTTTGTATACGAGCTGTGAACCA    246
                      ||  .|||||||..|.||.||.||.|||||.|||||.||||||||.||.
BPUM_1214___g    198 -GAATACATACCAATTAGAAGATTGTATTTTATATACAAGCTGTGAGCCT    246

BSNT_02216___    247 TGCCCAATGTGCTTGGGCGCCATCTACTGGGCCCGGCCTAAAGCCGTTTT    296
                     ||||||||||||.|.|||||.||.||||||||..|.||.|||||.||.|.
BPUM_1214___g    247 TGCCCAATGTGCCTTGGCGCTATTTACTGGGCTAGACCAAAAGCGGTCTA    296

BSNT_02216___    297 CTATGCAGCTGAGCACA-CAGACGCTGCCGAAG---CCGGGTTTGATGAT    342
                     .|.|||.|||  |.||| |||  |.|||.|.||   |.||.||||||||.
BPUM_1214___g    297 TTTTGCTGCT--GGACATCAG--GATGCAGCAGTTTCTGGCTTTGATGAC    342

BSNT_02216___    343 TCATTCATTTATAAAGAAATTGATAAACCTGCTGAAGAAAGAACGATCCC    392
                     ||.||.||||||.|||||||..|||||..|...|||..|||||..||.||
BPUM_1214___g    343 TCGTTTATTTATGAAGAAATCAATAAAGATTACGAATCAAGAAATATTCC    392

BSNT_02216___    393 CTTTTATCAAGTGACACT--AACAGAGCATTTATCCCCGTTTCAAGCATG    440
                     .||||||||..|||||||  ||.|.|.|.||  .|.||.|||.|||||||
BPUM_1214___g    393 ATTTTATCAGCTGACACTTCAAAAAACCCTT--GCACCATTTGAAGCATG    440

BSNT_02216___    441 GCGGAAC-TTCG-CCAATAAGAAAGAATATTAA    471
                     | |.||| |.|| .||| |||||||||||||||
BPUM_1214___g    441 G-GCAACATACGAACAA-AAGAAAGAATATTAA    471


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