Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02216 and BPUM_1214
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence dna-align/BSNT_02216___guaD.1.24716.seq
# -bsequence dna-align/BPUM_1214___guaD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02216___guaD-BPUM_1214___guaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02216___guaD-BPUM_1214___guaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02216___guaD
# 2: BPUM_1214___guaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 349/483 (72.3%)
# Similarity: 349/483 (72.3%)
# Gaps: 24/483 ( 5.0%)
# Score: 1141.0
#
#
#=======================================
BSNT_02216___ 1 ATGAATCATGAAACGTTCTTAAAACGGGCTGTCACTCTCGCATGT-GAAG 49
||||||||.|||...||.|||.||||.||..|...|||.||| || ||||
BPUM_1214___g 1 ATGAATCACGAAGATTTTTTACAACGCGCAATTGATCTTGCA-GTAGAAG 49
BSNT_02216___ 50 GAGTGAATGCAGGAATCGGCGGGCCTTTTGGAGCCGTTATCGTGAAAGAC 99
||||.|||...||.|..|||||.|||||||||||.||.||.||.||.||.
BPUM_1214___g 50 GAGTCAATAGTGGTACTGGCGGCCCTTTTGGAGCAGTCATTGTCAAGGAT 99
BSNT_02216___ 100 GGAGCCATTATTGCAGAGGGACAG-AACAACGTCACAACAAGCAATGATC 148
|||...||||||||.|||||| || |||||.||.|||||||..|||||||
BPUM_1214___g 100 GGACAGATTATTGCTGAGGGA-AGCAACAATGTGACAACAACGAATGATC 148
BSNT_02216___ 149 CGACTGCCCACGCGGAAGTCACAGCTATTCGGAAAGCCTGTAAGGTGCTA 198
|.||.||.||.||.|||||||||||.|||||.||.||.||..|...|||
BPUM_1214___g 149 CAACCGCACATGCTGAAGTCACAGCCATTCGAAAGGCGTGCCAAACGCT- 197
BSNT_02216___ 199 GGA--GCATACCAGCTTGATGACTGCATTTTGTATACGAGCTGTGAACCA 246
|| .|||||||..|.||.||.||.|||||.|||||.||||||||.||.
BPUM_1214___g 198 -GAATACATACCAATTAGAAGATTGTATTTTATATACAAGCTGTGAGCCT 246
BSNT_02216___ 247 TGCCCAATGTGCTTGGGCGCCATCTACTGGGCCCGGCCTAAAGCCGTTTT 296
||||||||||||.|.|||||.||.||||||||..|.||.|||||.||.|.
BPUM_1214___g 247 TGCCCAATGTGCCTTGGCGCTATTTACTGGGCTAGACCAAAAGCGGTCTA 296
BSNT_02216___ 297 CTATGCAGCTGAGCACA-CAGACGCTGCCGAAG---CCGGGTTTGATGAT 342
.|.|||.||| |.||| ||| |.|||.|.|| |.||.||||||||.
BPUM_1214___g 297 TTTTGCTGCT--GGACATCAG--GATGCAGCAGTTTCTGGCTTTGATGAC 342
BSNT_02216___ 343 TCATTCATTTATAAAGAAATTGATAAACCTGCTGAAGAAAGAACGATCCC 392
||.||.||||||.|||||||..|||||..|...|||..|||||..||.||
BPUM_1214___g 343 TCGTTTATTTATGAAGAAATCAATAAAGATTACGAATCAAGAAATATTCC 392
BSNT_02216___ 393 CTTTTATCAAGTGACACT--AACAGAGCATTTATCCCCGTTTCAAGCATG 440
.||||||||..||||||| ||.|.|.|.|| .|.||.|||.|||||||
BPUM_1214___g 393 ATTTTATCAGCTGACACTTCAAAAAACCCTT--GCACCATTTGAAGCATG 440
BSNT_02216___ 441 GCGGAAC-TTCG-CCAATAAGAAAGAATATTAA 471
| |.||| |.|| .||| |||||||||||||||
BPUM_1214___g 441 G-GCAACATACGAACAA-AAGAAAGAATATTAA 471
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