Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02212 and BPUM_1213
See
Amino acid alignment /
Visit
BSNT_02212 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence dna-align/BSNT_02212___ykzA.1.24716.seq
# -bsequence dna-align/BPUM_1213___ohrB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02212___ykzA-BPUM_1213___ohrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02212___ykzA-BPUM_1213___ohrB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02212___ykzA
# 2: BPUM_1213___ohrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 300/430 (69.8%)
# Similarity: 300/430 (69.8%)
# Gaps: 32/430 ( 7.4%)
# Score: 1006.5
#
#
#=======================================
BSNT_02212___ 1 ATG---GCACTATTTACAGCAAAAGTAACCGCGCGAGGC-------GGAC 40
||| .||.||||.||||||||||||| |||| |||.
BPUM_1213___o 1 ATGAAACCATTATTCACAGCAAAAGTAA-------AGGCACAACATGGAA 43
BSNT_02212___ 41 GGGCAGGACATATTAC-ATCAGATGACGGTGTTCTTGATTTTGATATTGT 89
|.||.|||||| .||| .|||||.||.|||||.||.|||..|.|||||||
BPUM_1213___o 44 GAGCTGGACAT-GTACGTTCAGAAGATGGTGTGCTCGATCATAATATTGT 92
BSNT_02212___ 90 CATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGC 139
||||||.|||||.||.|||||.|||.||||.||.||.|||||.||.||..
BPUM_1213___o 93 CATGCCTAATGCAAAGAAAGATGGAGAAACTGGTACGAATCCAGAGCAAT 142
BSNT_02212___ 140 TCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTA 189
|.|||||.||.||.|||||.||.||.|||||.||.||.||.||.||.|||
BPUM_1213___o 143 TATTTGCAGCGGGCTATGCAGCTTGTTTCGGAGGGGCACTTGAGCAAGTA 192
BSNT_02212___ 190 GCCAAAGAGCAGAATATCGAAATTGATTCGGAGATTGAAGGGCAGGTCAG 239
||.|||.||||....|||||.|||||.||.||..||||.||.||.|||||
BPUM_1213___o 193 GCGAAAAAGCAAGGGATCGACATTGAATCAGAAGTTGAGGGACATGTCAG 242
BSNT_02212___ 240 CCTCATGAAGGATGAGAGCGACGGCGGGTTTAAAATCGGTGTCACACTAG 289
.||..|.||.||.||.||.||.|||||.|||||..|.|||||||..|||.
BPUM_1213___o 243 TCTTTTAAAAGACGAAAGTGATGGCGGATTTAAGCTTGGTGTCAAGCTAA 292
BSNT_02212___ 290 TTGTG-----AACACGAAAGATTTAGATCGGGAAAAAGCACATGAGCTTG 334
||||| || ||.||.|| ||.|..||.|||||..|.|||||.|
BPUM_1213___o 293 TTGTGTCTGCAA----AAGGACTT-GACCATGACAAAGCGAAAGAGCTAG 337
BSNT_02212___ 335 TCAACGCCGCTCATGAATTCTGTCCTTACTCAAAGGCAACCAGAGGAAAT 384
.|.|.||.||.||||||||||||||.||.|||||.|||||.|||||||||
BPUM_1213___o 338 CCCATGCTGCGCATGAATTCTGTCCATATTCAAAAGCAACAAGAGGAAAT 387
BSNT_02212___ 385 GTTGATGTAAAACTAGAATT---AAAATAA 411
.|.||.|||.|.||.|||.| ..|||||
BPUM_1213___o 388 ATCGAAGTAGAGCTTGAAGTGGCTGAATAA 417
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.