Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02207 and BPUM_1211
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence dna-align/BSNT_02207___yklA.1.24716.seq
# -bsequence dna-align/BPUM_1211___ohrA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02207___yklA-BPUM_1211___ohrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02207___yklA-BPUM_1211___ohrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02207___yklA
# 2: BPUM_1211___ohrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity: 321/459 (69.9%)
# Similarity: 321/459 (69.9%)
# Gaps: 63/459 (13.7%)
# Score: 1083.5
#
#
#=======================================
BSNT_02207___ 1 ATGAGTCAGCCA----TTATTTACAGCAACTGTTTCAGCGGTAGGAGGAA 46
|| ||||| | ||||||||.|||||.||||||||.||.|||||||
BPUM_1211___o 1 AT--GTCAG--AAGTTTTATTTACTGCAACGGTTTCAGCTGTCGGAGGAA 46
BSNT_02207___ 47 GAGAAGGAAAGGTCATTTCATCAGACCGCGTTCTTGAGCTTGATGTCGCA 96
|||||||||||||..|||||...||..|.||.|||||||.||||||.|||
BPUM_1211___o 47 GAGAAGGAAAGGTTGTTTCAAATGATGGAGTGCTTGAGCATGATGTAGCA 96
BSNT_02207___ 97 ATGCCGGGGACACCAAGAGCAAAGAAATTAGAAAAAGCGACAAATCCAGA 146
|||||.||.|||||||||||.||.|||.||||||||||.|||||.|||||
BPUM_1211___o 97 ATGCCTGGAACACCAAGAGCGAAAAAAATAGAAAAAGCAACAAACCCAGA 146
BSNT_02207___ 147 GCAGCTGTTTGCAGCAGGTTATGCAGCTTGCTTTGA--CAGCGCCCTGCA 194
|||..|.|||||||||||.||..|.||.||.||||| || ||.||.||
BPUM_1211___o 147 GCAATTATTTGCAGCAGGCTACTCTGCATGTTTTGATTCA--GCTCTTCA 194
BSNT_02207___ 195 GCTTGTCGCAAGAACAGAACGGGTA---------AAAGTAGAGACAGAGG 235
..|.|||||||||..||| |.||| ||||| ||.|
BPUM_1211___o 195 AATGGTCGCAAGACAAGA--GCGTATCCGTTTTGAAAGT-------GAAG 235
BSNT_02207___ 236 TTACAGCGAATGTAAGTCT--GTTAAAG--------GATGAAGCGGACCA 275
|.|||||..||||.|| || ||.|||| |||| ||
BPUM_1211___o 236 TAACAGCACATGTGAG-CTTAGTCAAAGACAGTTCAGATG--GC------ 276
BSNT_02207___ 276 GGGCTACAAGCTTGGTGTGACGCTGCAAGTAAAAGGAGAAGGAGTCAGTG 325
||||.|||.||.||.||.|.|.|..|||||||||||...|||.|| |.|
BPUM_1211___o 277 -GGCTTCAAACTCGGCGTTAAGTTAGAAGTAAAAGGAACTGGAATC-GAG 324
BSNT_02207___ 326 C-ATCAGAATTGGAGGCGCTTGTGAAAAAAGCGCACGGCGTCTGCCCGTA 374
| |||.|.|||.||.|.||||||..|.|||||.||||||||||||||.||
BPUM_1211___o 325 CAATCTGCATTAGATGAGCTTGTTCATAAAGCACACGGCGTCTGCCCATA 374
BSNT_02207___ 375 TTCAAAAGCAACCTC-CGGAAATATTGATGTGACACTTGAAGTTGCTG-- 421
||||||||||| ||| .||||||||.||.|| |.|.|| |||.||||
BPUM_1211___o 375 TTCAAAAGCAA-CTCAAGGAAATATCGAAGT-AGAATT--AGTAGCTGTC 420
BSNT_02207___ 422 ----AATAA 426
|||||
BPUM_1211___o 421 GCACAATAA 429
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