Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02173 and BPUM_1162
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence dna-align/BSNT_02173___ykaA.1.24716.seq
# -bsequence dna-align/BPUM_1162___ykaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02173___ykaA-BPUM_1162___ykaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02173___ykaA-BPUM_1162___ykaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02173___ykaA
# 2: BPUM_1162___ykaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 621
# Identity: 494/621 (79.5%)
# Similarity: 494/621 (79.5%)
# Gaps: 6/621 ( 1.0%)
# Score: 1926.0
#
#
#=======================================
BSNT_02173___ 1 ATGATAAGAAGAAAAAAAGATAAGTTCTCACTCCTTTTAACAGAAATTGC 50
|||.|||.|||.||||||||.|||||.||..||.|.|||||.||||||||
BPUM_1162___y 1 ATGTTAAAAAGGAAAAAAGACAAGTTTTCCGTCTTGTTAACGGAAATTGC 50
BSNT_02173___ 51 AAAGAACATAGACGAAACTGCAGAATATTTTGTGAATTTTAAGGTCACTA 100
.||.||..||||.||||||||.||.||||||||.|..|.|||.||.||.|
BPUM_1162___y 51 TAAAAATTTAGATGAAACTGCTGAGTATTTTGTTAGCTATAAAGTAACAA 100
BSNT_02173___ 101 ACCAAACGACTCTTAAAGAATTTGCAGATACGTTAAAGGAATATGAAACA 150
|.|||||.|||||.|||||||||.|.||.||.||.|||||||||||.|||
BPUM_1162___y 101 ATCAAACCACTCTGAAAGAATTTTCTGACACATTGAAGGAATATGAGACA 150
BSNT_02173___ 151 AAAGGTGACAATCATGTCCATGTCATGATTAAAGAGCTTAACAAAGCGTT 200
||||||||.||||||||.|||...||||||||||||||.||||||||.||
BPUM_1162___y 151 AAAGGTGATAATCATGTTCATACGATGATTAAAGAGCTGAACAAAGCCTT 200
BSNT_02173___ 201 CATCACTCCTATTGAGCGCGAAGATATCCTTCAGCTGACAAACAGCTTGG 250
.||.||.||.|||||.||.|||||.||.|||||..||||.||.|||.|.|
BPUM_1162___y 201 TATTACACCGATTGAACGTGAAGACATTCTTCAATTGACGAATAGCCTCG 250
BSNT_02173___ 251 ATGATGTGCTTGACGGAATCGAACATTTCTCTGCCATGATGGAAATTTTC 300
|.|||||..|.||.|||||.||.|||||.||.||.|..||||||||||..
BPUM_1162___y 251 ACGATGTTTTAGATGGAATTGAGCATTTTTCAGCAACAATGGAAATTTAT 300
BSNT_02173___ 301 TCAATTACTTCATCAGACGAGCATATCGATAAATTCAGCGGATACATCAG 350
|||||.||....||.|||||.||||||||.|||||||||...||||||||
BPUM_1162___y 301 TCAATGACAAGCTCTGACGAACATATCGACAAATTCAGCCACTACATCAG 350
BSNT_02173___ 351 AGAATGCGCGAAAGAGATTTTGATTACGATCGAGCTGCTGGCAGAAAATC 400
||||||.||.||.||.|||||.|||||.|||||..|.|||||.|||||||
BPUM_1162___y 351 AGAATGTGCAAAGGAAATTTTAATTACAATCGATTTACTGGCTGAAAATC 400
BSNT_02173___ 401 GCTTAAAGGATATTCAGCCTCACGCAATCAAAATAAAAGAGTAT-GAGCA 449
|||||||.||||||||.||.||||||||||||||.|||||| || |||||
BPUM_1162___y 401 GCTTAAAAGATATTCAACCACACGCAATCAAAATCAAAGAG-ATCGAGCA 449
BSNT_02173___ 450 CAGCTGTGACAA-CTTGCACAGAAAATCATTAAAGAATCTT-TTCGGAAA 497
.|..|||||||| ||| .|..|.||||||.||||||| ||| ||.|||||
BPUM_1162___y 450 TAATTGTGACAATCTT-TATCGTAAATCACTAAAGAA-CTTGTTTGGAAA 497
BSNT_02173___ 498 TGAAACAGACCCAATCAAAGTCATTCAATATCGTGAAATTTACGAAACGC 547
.|||||.||.||||||||.|||||||||||....||||||||||||||.|
BPUM_1162___y 498 AGAAACGGATCCAATCAAGGTCATTCAATACAAAGAAATTTACGAAACAC 547
BSNT_02173___ 548 TTGAAGAAATCGCCGACTCTTGTCAAAGTGTTGCCAATAATCTTGAAACC 597
||||||||||.||.||.||.||||||.||||||||||.|||||.|||||.
BPUM_1162___y 548 TTGAAGAAATTGCTGATTCCTGTCAAGGTGTTGCCAACAATCTAGAAACA 597
BSNT_02173___ 598 ATCATTATGAAAAACGCGTAA 618
|||||||||||.||.||||||
BPUM_1162___y 598 ATCATTATGAAGAATGCGTAA 618
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