Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05380 and BPUM_1150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_05380___hag.1.24716.seq
# -bsequence dna-align/BPUM_1150___hag3.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05380___hag-BPUM_1150___hag3.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05380___hag-BPUM_1150___hag3.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05380___hag
# 2: BPUM_1150___hag3
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 947
# Identity: 746/947 (78.8%)
# Similarity: 746/947 (78.8%)
# Gaps: 58/947 ( 6.1%)
# Score: 2948.5
#
#
#=======================================
BSNT_05380___ 1 ATGAGAATTAACCACAATATCGCAGCGCTTAACACACTGAACCGTTTGTC 50
|||||||||||.||||||||||||||.|||||||||.|.|||||||||||
BPUM_1150___h 1 ATGAGAATTAATCACAATATCGCAGCACTTAACACATTAAACCGTTTGTC 50
BSNT_05380___ 51 TTCAAACAACGGTGCGAGCCAAAAGAACATGGAGAAACTGTCTTCAGGTC 100
|.|||||||||||||||||||||||||||||||||||||.|||||.||||
BPUM_1150___h 51 TGCAAACAACGGTGCGAGCCAAAAGAACATGGAGAAACTTTCTTCTGGTC 100
BSNT_05380___ 101 TTCGTATCAACCGTGCGGGAGATGACGCAGCGGGTCTTGCGATTTCTGAA 150
||...|||||||||||.|||||||||||.||.|||||.||.||.||||||
BPUM_1150___h 101 TTAAAATCAACCGTGCAGGAGATGACGCTGCAGGTCTAGCAATCTCTGAA 150
BSNT_05380___ 151 AAAATGAGAGGACAAATCAGAGGTCTTGAAATGGCTTCTAAAAACTCTCA 200
||||||.|.|||||||||.|.||..|.|||||||||.||||||||.|.||
BPUM_1150___h 151 AAAATGCGTGGACAAATCCGCGGGTTAGAAATGGCTACTAAAAACGCACA 200
BSNT_05380___ 201 AGACGGAATTTCTCTTATCCAAACAGCTGAGGGTGCATTGACTGAAACTC 250
.|||||.||.||||||||||||||||||||.|||||||||||||||||||
BPUM_1150___h 201 GGACGGTATCTCTCTTATCCAAACAGCTGAAGGTGCATTGACTGAAACTC 250
BSNT_05380___ 251 ACTCTATTCTTCAACGTGTTCGTGAACTAGTTGTTCAAGCAGGAAACACA 300
||||.||.|||||||||||.|||||.||.||.||.|||||.||||||||.
BPUM_1150___h 251 ACTCAATCCTTCAACGTGTACGTGAGCTTGTCGTACAAGCTGGAAACACG 300
BSNT_05380___ 301 GGTACTCAAGATGGTACTGACCTTCAAGCGATCCAAGACGAGATCACTTC 350
|||||.|||||||||||.||||||...|||||.|||||.||.|||.||..
BPUM_1150___h 301 GGTACACAAGATGGTACAGACCTTGGTGCGATTCAAGAAGAAATCGCTAA 350
BSNT_05380___ 351 ACTTGTTGAAGAAATCGGTGGCGG----AACAAACGCTAACGGTATCTCT 396
.||.|||.|||||||.||||.||| ..|||| ||||||||||||
BPUM_1150___h 351 CCTAGTTCAAGAAATTGGTGACGGTTCTGGCAAA----AACGGTATCTCT 396
BSNT_05380___ 397 GACCGTACTGAGTTTAACGGTAAAAAACTTCTTAATGGCGATTTC-TCGC 445
||.|||||.||.||||||||.||.|||.|.|||.|.||...|||| .|||
BPUM_1150___h 397 GATCGTACAGAATTTAACGGAAAGAAATTACTTGACGGTACTTTCAGCGC 446
BSNT_05380___ 446 AAGCTAGCGGT------AAATCATTAACATTCCAAATCGGAGC---TAAC 486
||||.|.|.| |||||||||||.||||||||.||.|| |||
BPUM_1150___h 447 -AGCTGGTGCTACACCAAAATCATTAACTTTCCAAATTGGTGCAAATAA- 494
BSNT_05380___ 487 AGCAGTCAACAGCTTTCTGTCAACATTGAAAGC-ATGGCAGCTACAGCAA 535
|||| |||.|..|...|||.|||||.| |||| |||.|..||||||||.
BPUM_1150___h 495 AGCA--CAAAAATTAGATGTGAACATCG-AAGCAATGTCTTCTACAGCAC 541
BSNT_05380___ 536 TTGGTGCTTTAGATACAGACGGTACGACACTTCTTA---CTGGACAAGCA 582
|||||||.|||||..|.|||||.||| |||| |.|..||.|||
BPUM_1150___h 542 TTGGTGCATTAGAAGCTGACGGAACG------CTTAAAGCAGATCACGCA 585
BSNT_05380___ 583 GTATCTGACATCGACGTAACAAAATTTAAAGATAATGCGGCTGA---CAC 629
|||.||||||||||.||||||.|||| .||||| .||
BPUM_1150___h 586 GTAGCTGACATCGATGTAACACAATT------------CGCTGATCCGAC 623
BSNT_05380___ 630 TGCTACTGTAGGA------TTCAATGCTCAACTTA-AAACAGTTGATGAC 672
||||.|||..|.| ||..|||.|||| ||| |.|..|||||||..
BPUM_1150___h 624 TGCTGCTGGCGCACTTTCTTTTGATGATCAA-TTAGATATCGTTGATGGA 672
BSNT_05380___ 673 GCAATCAACAC-AGTTTCTAAACAACGTTCAAAATTAGGTGCGGTACAAA 721
||.||||| || |||.|||.|.||||||||.|||.|.|||||.||.||||
BPUM_1150___h 673 GCGATCAA-ACAAGTATCTGACCAACGTTCTAAACTCGGTGCAGTTCAAA 721
BSNT_05380___ 722 ACCGTCTTGAGCACACAATCAACAACTTAAGCGCTTCTGGTGAAAACCTG 771
|||||||.||||||||||||||||||.|..|.|||||||||||||||.|.
BPUM_1150___h 722 ACCGTCTAGAGCACACAATCAACAACCTTGGTGCTTCTGGTGAAAACTTA 771
BSNT_05380___ 772 ACTGCTGCTGAGTCTCGTATCCGTGACGTTGACATGGCGAAAGAAATGAG 821
||.|||||||||||||||||||||||||||||.|||||.|||||||||||
BPUM_1150___h 772 ACAGCTGCTGAGTCTCGTATCCGTGACGTTGATATGGCTAAAGAAATGAG 821
BSNT_05380___ 822 CGAGTTCACAAAGAACAACATTCTTTCTCAGGCTTCTCAAGCGATGCTGG 871
.|||||||||||||||||||||||||||||.|||||.|||||.|||||.|
BPUM_1150___h 822 TGAGTTCACAAAGAACAACATTCTTTCTCAAGCTTCACAAGCAATGCTTG 871
BSNT_05380___ 872 CTCAAGCAAACCAACAACCGCAAAACGTACTTCAATTATTACGTTAA 918
|.|||||||||||||||||.||||||||||||||.|||.|.||||||
BPUM_1150___h 872 CACAAGCAAACCAACAACCACAAAACGTACTTCAGTTACTTCGTTAA 918
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