Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06255 and BPUM_1144
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence dna-align/BSNT_06255___yosT.1.24716.seq
# -bsequence dna-align/BPUM_1144___yosT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06255___yosT-BPUM_1144___yosT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06255___yosT-BPUM_1144___yosT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06255___yosT
# 2: BPUM_1144___yosT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 527
# Identity: 276/527 (52.4%)
# Similarity: 276/527 (52.4%)
# Gaps: 154/527 (29.2%)
# Score: 627.0
#
#
#=======================================
BSNT_06255___ 1 -------------TTGAAAATAACTATTG-AAGAATTACCTGAATCAAGG 36
||||| ||.| |||.|.|| |||| |
BPUM_1144___y 1 ATGAATTACAAAATTGAA-------ATCGTAAGCAATA--TGAA-----G 36
BSNT_06255___ 37 ATTGCTTATTTCAGAAATGTTGGGGAGTACGGT-GAAAAGCAAAACAAAG 85
||.|..|||.|.||.|||...||....||.||| |.|||| ||||...||
BPUM_1144___y 37 ATGGTGTATATGAGGAATAAAGGACCATATGGTAGCAAAG-AAAATGTAG 85
BSNT_06255___ 86 AATTAATGGAGACTTTTAAAAAGTGG-----GCAA----AATTGAATGAT 126
|..|.|||.|||..||||||.|.||| .||| ||||.||||||
BPUM_1144___y 86 AGATGATGAAGAGATTTAAACAATGGATCAATCAACATCAATTAAATGAT 135
BSNT_06255___ 127 GTATTTGATAATTCTACAATTTTAGGCATA----------------CCGC 160
| ||||..|||.||| ||.|
BPUM_1144___y 136 G----------------AATTAAAGGAATATGGTATATATGGTGTTCCTC 169
BSNT_06255___ 161 AAGATAACCC---AGAGATTACTCCTAAAGAGGAATGTCGTTATGATGTT 207
|||||.|.|| |.|.|||||.|| |||..||||..|.||.|| ..|
BPUM_1144___y 170 AAGATGATCCTGGAAAAATTACACC---AGAAAAATGCAGATACGA-CCT 215
BSNT_06255___ 208 TGTGTTG-TTATAAATAAAGATTTGAATGTGAAAAAACCAGCTCATGTTG 256
|.||||| |.|.|||||.||||| |.|.||||.|.|| .|||.||
BPUM_1144___y 216 TATGTTGATGACAAATAGAGATT----TCTCAAAAGATCA---AATGGTG 258
BSNT_06255___ 257 GAGA------ATTTTCTGGTGGGAAA-TATGCTGTTTTCTTGC-TTGAC- 297
.||| ||.||...|.|||||| ||||||||.| ||.| .||||
BPUM_1144___y 259 CAGACTAGACATGTTGAAGGGGGAAAGTATGCTGTGT--TTACAGTGACA 306
BSNT_06255___ 298 CATACAAAAGAGGCAGTCAGAGA----CTTTTGGGGCAATATTTCTTCTG 343
|||||||..||...||| || .||||||.||.| |||.|.||
BPUM_1144___y 307 CATACAACCGAAAAAGT----GAATTTGTTTTGGAGCCA-ATTGCCTC-- 349
BSNT_06255___ 344 AGATAGAAAGAAATAATC--TATCAAT-AAGAGAACA----------ACC 380
||||.||| .|.|||| ||..||||| |.|
BPUM_1144___y 350 ----------AAATGATCCAAAACAATCAATTGAACATGCGTCCGGCATC 389
BSNT_06255___ 381 AATTATAGAAAGATATACTCCACAAATGATTGATAA-------TCATTTG 423
.|||||.||.||||||| ||.|| .|| ||
BPUM_1144___y 390 TATTATGGAGAGATATA--------------GAGAAGAAGAAGGCA--TG 423
BSNT_06255___ 424 TGTGAAATATTAATTCCTATACAGTAA 450
|||||..|.|||.|.|||||....|||
BPUM_1144___y 424 TGTGAGTTCTTACTACCTATTTTTTAA 450
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