Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01974 and BPUM_1113

See Amino acid alignment / Visit BSNT_01974 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence dna-align/BSNT_01974.1.24716.seq
#    -bsequence dna-align/BPUM_1113___spoVIF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01974-BPUM_1113___spoVIF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01974-BPUM_1113___spoVIF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01974
# 2: BPUM_1113___spoVIF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     192/258 (74.4%)
# Similarity:   192/258 (74.4%)
# Gaps:           3/258 ( 1.2%)
# Score: 708.0
# 
#
#=======================================

BSNT_01974         1 ATGGATAATCAATTTTTTAAGAACATCGAAAAGAAAACAGGTGTGAAGAT     50
                     |||||||||.||||.|||||.|.|.|.|||||.|||||.||||||||.||
BPUM_1113___s      1 ATGGATAATAAATTCTTTAAAAGCGTTGAAAATAAAACGGGTGTGAATAT     50

BSNT_01974        51 GCAGGATGTAATGAATCTTGCCGGATCACTCCAAAACGCTAATTTTAAAG    100
                     |.|.|||||..|.||.||.||.||.||..|.|||||.||.||.|||||||
BPUM_1113___s     51 GAACGATGTCTTTAAACTGGCAGGTTCTTTGCAAAATGCGAACTTTAAAG    100

BSNT_01974       101 ATGAAAATACAGTCCGCAGTGTGATTAACCGCGTAGCGCAGCTGGCAAAC    150
                     |||||...||.||.||..|.||.|||||....|||||.|||||.|||||.
BPUM_1113___s    101 ATGAAGCAACGGTTCGAGGCGTCATTAAAAAAGTAGCACAGCTTGCAAAT    150

BSNT_01974       151 AGACGCGTGCCAAAAGAATTAGAAGATAAAATTGTGGAATCTATTACAAG    200
                     |.|||.||.||.||||||.|.|||||.|||||.||..||||.||||||||
BPUM_1113___s    151 AAACGTGTACCGAAAGAAATGGAAGACAAAATCGTTCAATCGATTACAAG    200

BSNT_01974       201 CGGAAAAGAAAAGCTTGATTTTGGCACGATTTCTAAAATGATGGATAATA    250
                     .||||||||||||||||||||....||.||..|||||||||||.|.||.|
BPUM_1113___s    201 TGGAAAAGAAAAGCTTGATTTCAATACCATCGCTAAAATGATGAACAACA    250

BSNT_01974       251 AATAA---    255
                     ||.||   
BPUM_1113___s    251 AAAAATAA    258


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