Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01949 and BPUM_1095
See
Amino acid alignment /
Visit
BSNT_01949 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence dna-align/BSNT_01949___tenI.1.24716.seq
# -bsequence dna-align/BPUM_1095___tenI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01949___tenI-BPUM_1095___tenI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01949___tenI-BPUM_1095___tenI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01949___tenI
# 2: BPUM_1095___tenI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 709
# Identity: 404/709 (57.0%)
# Similarity: 404/709 (57.0%)
# Gaps: 167/709 (23.6%)
# Score: 1031.0
#
#
#=======================================
BSNT_01949___ 1 ---------------GTGGAGCTTCACGCCATAACGGATGA--------C 27
.||||.||.|||||..|.||..|||| |
BPUM_1095___t 1 ATGGGGTTGGTGCAAATGGAACTCCACGCAGTGACAAATGATTCGCTTCC 50
BSNT_01949___ 28 AGCAAGCCGGTAGAAGAGCTAGCGA--GAAC-CATCATTTCGATTCAGAA 74
.|| ||||||||| || .||| .||.||..|.||| |.|
BPUM_1095___t 51 TGC--------AGAAGAGCT---GATCAAACAAATAATAGCCATT--GCA 87
BSNT_01949___ 75 --TGAAGTTGATTTTATTCACATTCGGGAACGCTCAAAATCGGC------ 116
||||||.|||||||||||.||.||||||||.||.|||.|.||
BPUM_1095___t 88 TCTGAAGTCGATTTTATTCATATCCGGGAACGGTCTAAAACAGCAAGTGA 137
BSNT_01949___ 117 ---GGCGGATATTCTGAAACTGCTCGAG-CTTATTTTTGAAGGCGGT--- 159
.|..|||.|..||||| || ||..||||.|||||.|.|
BPUM_1095___t 138 GCTTGTTGATCTCGTGAAA-------AGTCTCCTTTTAGAAGGTGTTCCG 180
BSNT_01949___ 160 ATAGATAAACGAAAACTGGTGATGAACGGGCGCGTGGATATTGCACTTTT 209
|.||| |||.||..|.||.||||...|.||.||..||||.||..|
BPUM_1095___t 181 AAAGA------AAAGCTCATCATCAACGACAGAGTAGACGTTGCGCTACT 224
BSNT_01949___ 210 CTCTACTATTCACCGCGTGCAGCTGCCAAGCGGCAGCTTTTCACCGAAGC 259
|.|||.|||||||||.||.||.||.|||.|....||||||||.||.||
BPUM_1095___t 225 CACTAATATTCACCGTGTACATCTCCCAGGTCATAGCTTTTCGCCAAA-- 272
BSNT_01949___ 260 AGGTCAGAGC-------CAGATTTCCACACCTTCATATCGGGAG-GTCGG 301
||||| .|.|||.|||||||||||| .||||.| .||.|
BPUM_1095___t 273 -----AGAGCTGCGGGAAAAATTCCCACACCTTCAT-GCGGGCGTCTCAG 316
BSNT_01949___ 302 TGCATTCACTGGAGGAAGCGGTTCAAGCAG-------AAAAGGAAGACGC 344
|.|||||..|.||.||||.| .|||||| |||.||| ||
BPUM_1095___t 317 TTCATTCGATTGAAGAAGGG---AAAGCAGCTGAGAAAAATGGA----GC 359
BSNT_01949___ 345 GGACTACGTGCTGTTCGGCCATGTGTTTGAAACGGATTGCAAAAAGGGTC 394
.||.||.||..|.||.||.||.||.|.|||.||...|||.|||...||.|
BPUM_1095___t 360 AGAGTATGTCATATTTGGGCACGTATATGACACCACTTGTAAACCAGGAC 409
BSNT_01949___ 395 TTGAAGGC-AGAGGAGT--ATCTT-TG------CTG-----TCAACTATC 429
|| .|||| |||||.|| |.||| || ||| ||.||||||
BPUM_1095___t 410 TT-CAGGCAAGAGGCGTACAGCTTGTGAAAGAACTGACATCTCTACTATC 458
BSNT_01949___ 430 AAACAGCGGATTTCCATCCCGGTTATAGCCATCGGGGGGATGACGCCGGA 479
.| ||||| |||.||||.|||||.||..||||.||.||
BPUM_1095___t 459 TA---------TTCCA-----GTTGTAGCGATCGGTGGAGTGACACCTGA 494
BSNT_01949___ 480 --------CAG-GTTAAGAGACGTAAA--ACAAGCAGGGGCAGACGGCAT 518
||| .||.|||.||||.|| ..|| |||| ||
BPUM_1095___t 495 GCGCGTTCCAGAATTGAGACACGTGAATGTGAA--AGGG---------AT 533
BSNT_01949___ 519 CGCTGTTATGTCAGGAATTTT--CTCTTCCGCTGAGCC------CTTGGA 560
.||.||.|||||.|||||||| |||.|| .|.|||| ..|||.
BPUM_1095___t 534 AGCGGTGATGTCTGGAATTTTTACTCATC--ATCAGCCGCGCAAAATGGC 581
BSNT_01949___ 561 AGCAGCCAGACGATATTC-CCGCAAGCTAAAGGAGATGCGCTATGAAAAG 609
|..||| ||.||| ...|||| |||||||||..|..||||||.|.
BPUM_1095___t 582 ACAAGC------ATTTTCTAAACAAG-TAAAGGAGAATCCTTATGAAGAA 624
BSNT_01949___ 610 GCATTATGA 618
|||||||||
BPUM_1095___t 625 GCATTATGA 633
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.