Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01948 and BPUM_1094
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence dna-align/BSNT_01948___tenA.1.24716.seq
# -bsequence dna-align/BPUM_1094___tenA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01948___tenA-BPUM_1094___tenA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01948___tenA-BPUM_1094___tenA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01948___tenA
# 2: BPUM_1094___tenA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 760
# Identity: 508/760 (66.8%)
# Similarity: 508/760 (66.8%)
# Gaps: 98/760 (12.9%)
# Score: 1628.0
#
#
#=======================================
BSNT_01948___ 1 GTGAAGTTTTCA---------GAAGAATGCCGCAGCGCAGCCGCAGAATG 41
.|||.||||||| .||||| |||||.|||..|||
BPUM_1094___t 1 ATGACGTTTTCAACTGAATGTAAAGAA---------GCAGCAGCAACATG 41
BSNT_01948___ 42 GTGGGAGGGGAGCTTTGTCCATCCGTTCGTTCAAGGAATCGGTGATGGAA 91
||||.|.||.|||||....||.||.||.||..|||||||.||.|||||.|
BPUM_1094___t 42 GTGGAATGGAAGCTTCACACACCCCTTTGTGAAAGGAATTGGAGATGGCA 91
BSNT_01948___ 92 CGCT-TC---CGATTGACCGTTTTAAATACTACGTACTTCAGGATTCCTA 137
|||| || |||| |||||.|.|||.|||||..|.||||||||.||
BPUM_1094___t 92 CGCTGTCACTCGAT----CGTTTCACATATTACGTGATGCAGGATTCATA 137
BSNT_01948___ 138 TTATTTAACGCATTTTGCAAAGGTGCAGTCATTTGGCGCCTCTTATGCGA 187
|||||||||.||||||||||||||.||..|||.|||.|| .||||
BPUM_1094___t 138 TTATTTAACTCATTTTGCAAAGGTTCAAGCATATGGAGC------GGCGA 181
BSNT_01948___ 188 ------AGGATCTT-TATACAACGGGGCGGATGGCAAGCCATGCCCAAGG 230
|||| ||| .||||.|||||..|.||||||...|||||.||.||
BPUM_1094___t 182 TTAGTGAGGA-CTTACATACGACGGGCAGAATGGCATATCATGCGCAGGG 230
BSNT_01948___ 231 TACATATGAGGCGGAAATGGCGCTTCATCGCGAGTTTGCCGAGCTGTT-- 278
.||.|||||.|||||..|..||||.|||.|..|.|||.|.|||||.||
BPUM_1094___t 231 AACGTATGAAGCGGAGCTATCGCTGCATAGAAAATTTACAGAGCTTTTAA 280
BSNT_01948___ 279 GGAAATCAGCGAGGAAG--AGCGTAAGGCGTTTAAGCCGTCTCCTACAGC 326
.||.|||| ||.|||| |.| |||...||||||||.|||||.||.||
BPUM_1094___t 281 AGATATCA--GATGAAGCCATC--AAGAACTTTAAGCCTTCTCCCACTGC 326
BSNT_01948___ 327 GTACTCTTATACATCCCATATGTACCGTTCGGTTTTGAGC--AGGAATTT 374
.||..|.|||||.||.|||||||||||.||.||....||| |.|| ||
BPUM_1094___t 327 TTATGCGTATACCTCTCATATGTACCGATCTGTGAAAAGCGGACGA--TT 374
BSNT_01948___ 375 CGCAGAAATCTTAGCGGCCCTGCTGCCATGCTACTGGCTTTATTACGAGG 424
||.|||.||.||.||.||..|..||||.|||||||||||||||||.||||
BPUM_1094___t 375 CGAAGAGATATTGGCTGCGTTATTGCCGTGCTACTGGCTTTATTATGAGG 424
BSNT_01948___ 425 TTGGTGAGAAATT-------GCTGCATTGCGATCCTGGGCATCCGATTTA 467
|.|||||.||..| .||.|| ||||..|||||||||||
BPUM_1094___t 425 TGGGTGAAAAGCTAAAACAAACTACA-------CCTGACCATCCGATTTA 467
BSNT_01948___ 468 TCAAAAGTGGATTGGGACGTACGGCGGTGACTGGTTTAGACAACAGGTTG 517
||||.|.||||||..|||.||.||.||.||.|||||||
BPUM_1094___t 468 TCAAGAATGGATTTTGACATATGGAGGGGATTGGTTTA------------ 505
BSNT_01948___ 518 AGGAG------------CAAATCAACCGCTTTGATGAGCTGGCGGAAAAC 555
||||| ||..||||||||||||||||.||.||.|||||
BPUM_1094___t 506 AGGAGCTCGTCTTTGAACAGGTCAACCGCTTTGATGAACTAGCCGAAAA- 554
BSNT_01948___ 556 AGCA-CGGAGGAAGTGCGTGCCAAGATGAAAGAGAATTTTGTCATCTCCA 604
|||| |.||..|.|||||.|||||.||||||||.||||||||.||.||.|
BPUM_1094___t 555 AGCACCAGAACATGTGCGGGCCAATATGAAAGAAAATTTTGTGATTTCTA 604
BSNT_01948___ 605 GCTACTATGAATATCAATTTTGGGGAATGGCCTATCGAAAAGAAGGCTGG 654
||||.||.|||||.||.||.||||..|||||.||||.|||||||...|||
BPUM_1094___t 605 GCTATTACGAATACCATTTCTGGGAGATGGCGTATCAAAAAGAAATGTGG 654
BSNT_01948___ 655 TCTGACAGC--GCCATAAAAGAGG-TGGAGGAATGTGGAGCTTCACGCCA 701
|..||||| | |.||.|.|.|| |||.|.|| .||||.||.|||||..
BPUM_1094___t 655 -CAAACAGCATG-CTTAGATGGGGTTGGTGCAA-ATGGAACTCCACGCAG 701
BSNT_01948___ 702 TAACGGATGA 711
|.||..||||
BPUM_1094___t 702 TGACAAATGA 711
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