Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01934 and BPUM_1085
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence dna-align/BSNT_01934___yjbI.1.24716.seq
# -bsequence dna-align/BPUM_1085___yjbI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01934___yjbI-BPUM_1085___yjbI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01934___yjbI-BPUM_1085___yjbI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01934___yjbI
# 2: BPUM_1085___yjbI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity: 310/403 (76.9%)
# Similarity: 310/403 (76.9%)
# Gaps: 8/403 ( 2.0%)
# Score: 1187.0
#
#
#=======================================
BSNT_01934___ 1 ATGGGACAATCGTTTAACGCACCTTATGAAGCGATTGGAGAGGAACTTCT 50
||||.|||||||||||||||||||||.||||||.||||||||||||||||
BPUM_1085___y 1 ATGGTACAATCGTTTAACGCACCTTACGAAGCGGTTGGAGAGGAACTTCT 50
BSNT_01934___ 51 ATCGCAACTTGTTGATACTTTTTATGAGCGTGTCGCGTCTCATCCTTTGC 100
|||||||||||||||||||||||||||...|||...||.|||||||||||
BPUM_1085___y 51 ATCGCAACTTGTTGATACTTTTTATGAAAATGTAAAGTGTCATCCTTTGC 100
BSNT_01934___ 101 TGAAGCCGATTTTTCCTAGCGATTTGACAGAAACCGCCAGGAAACAGAAG 150
|..|.||.|||||.||....||.||.|.||||||.||.||.|||||.||.
BPUM_1085___y 101 TTCATCCTATTTTCCCGGATGACTTAAAAGAAACAGCAAGAAAACAAAAA 150
BSNT_01934___ 151 CAATTCTTAACTCAGTATTTAGGCGGGCCTCCGCTTTATACCGAGGAGCA 200
||.||.|||||.||.|||||||||||.||.|||||||||||.||||||||
BPUM_1085___y 151 CAGTTTTTAACGCAATATTTAGGCGGACCCCCGCTTTATACAGAGGAGCA 200
BSNT_01934___ 201 CGGCCATCCTATGCTCAGAGCAAGGCATCTTCCCTTTCCAATTACAAACG 250
.|||||.||||||||..|.||.||.|||||.||.|||||.|||||..|.|
BPUM_1085___y 201 TGGCCACCCTATGCTACGGGCGAGACATCTCCCTTTTCCGATTACTGAGG 250
BSNT_01934___ 251 AGAGAGCTGATGCGTGGCTCAGCTGTATGAAGGACGCAATGGACCATGTA 300
||.|.|||||.||.|||||....||.|||.||||.||||||||.||.|||
BPUM_1085___y 251 AGCGGGCTGACGCATGGCTTGAATGCATGGAGGATGCAATGGATCAAGTA 300
BSNT_01934___ 301 GGGCTGGAGGGCGAAATTCGTGAGTTTTTGTTTGGCCGGCTGGAGTTGAC 350
||..|....|||||.||||||||.|||||.||||..|||||....||.||
BPUM_1085___y 301 GGATTAACCGGCGATATTCGTGACTTTTTATTTGAGCGGCTTTCTTTAAC 350
BSNT_01934___ 351 AGCAAGGCATATGGTGAATCAAAC----GGAAGCGGAGGATCGATCATCT 396
.||..|.||||||||.|||||||| |.|| |||||.||..||||
BPUM_1085___y 351 GGCTCGTCATATGGTCAATCAAACACCTGAAA----AGGATGGACGATCT 396
BSNT_01934___ 397 TGA 399
|||
BPUM_1085___y 397 TGA 399
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