Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01924 and BPUM_1078
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence dna-align/BSNT_01924___yjbE.1.24716.seq
# -bsequence dna-align/BPUM_1078___yjbE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01924___yjbE-BPUM_1078___yjbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01924___yjbE-BPUM_1078___yjbE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01924___yjbE
# 2: BPUM_1078___yjbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity: 457/696 (65.7%)
# Similarity: 457/696 (65.7%)
# Gaps: 69/696 ( 9.9%)
# Score: 1323.5
#
#
#=======================================
BSNT_01924___ 1 ATGG-AGCATGACTATCTGATTTCTCTGCTTGTCATTGTTGGGATTGACC 49
|||| |.|| ||.|..||.||.||..|.||..|.|||.||||.||.||.|
BPUM_1078___y 1 ATGGAAACA-GAGTGGCTCATATCCTTACTGATGATTATTGGCATCGATC 49
BSNT_01924___ 50 TGATCCTCGGCGGAGATAATGCGGTTG-TCATTGCCATGGCCAGCAGACA 98
||||..|.|||||.|||||.|| |||| |||||||.|||||.|||.| ||
BPUM_1078___y 50 TGATTTTAGGCGGTGATAACGC-GTTGATCATTGCGATGGCTAGCCG-CA 97
BSNT_01924___ 99 -TTTGCC---GGACAAGCAAAGAAAGCAAGCCATTAT-TCTCGGAACATT 143
.|||.| .|||| ||.|.||..|||||| ||| ..||||.|||.|
BPUM_1078___y 98 GCTTGTCAAATGACA---AACGCAATAAAGCCA-TATGGATCGGCACACT 143
BSNT_01924___ 144 TATTGCCGT--TGCCATGAGAATCGGATTAACAAGTGCAGCTGTATATCT 191
|.|.||||| || ||||||||...|.|.|||.||||.||.||.|||.|
BPUM_1078___y 144 TTTGGCCGTGCTG--ATGAGAATTACAATGACAGGTGCCGCAGTTTATTT 191
BSNT_01924___ 192 TTTGAACATTCCGTTCTTGCAGTGCGCCGGCGGAATTTTCCTGCTGTATT 241
.||||.|||.||.|..|||||.|....|||||||.||||.||.||.|||.
BPUM_1078___y 192 ATTGACCATCCCATATTTGCAATTTATCGGCGGACTTTTTCTCCTTTATA 241
BSNT_01924___ 242 TAGGATATCAGCTGCTGATTG---AAAAAAAAGACACGAAACACATTAAA 288
|||||||..|..||.|.|||| ||||.|||||..|||..|..||||||
BPUM_1078___y 242 TAGGATACAATTTGTTAATTGAACAAAAGAAAGAATCGATTCGTATTAAA 291
BSNT_01924___ 289 AGCAGCACCTCCCTGTGGAGAGCGATACGAACGATTGTGCTTGCAGATCT 338
||||||..||||||.|||.|.|||.|||..||.||||||.||||.||.||
BPUM_1078___y 292 AGCAGCGGCTCCCTTTGGCGTGCGGTACAGACCATTGTGATTGCTGACCT 341
BSNT_01924___ 339 CTTTATGTCGCTGGACAACGTCATCGCAGTTGCGGGAGCTTCACACGG-- 386
|||||||||.||.||.||.||.||.||||||||.||.||..||.|.||
BPUM_1078___y 342 CTTTATGTCACTTGATAATGTGATTGCAGTTGCAGGGGCAGCAAAAGGCA 391
BSNT_01924___ 387 ---TGAGTTTTCT--CT--CGTTGTTATAGGTTTGTGTGTATCGGTTCCG 429
|| ||.|| || |.||| ||.|..|| .|.||.||.|||
BPUM_1078___y 392 ACATG---TTGCTGACTGCCTTTG-----GGCTGATG-ATTTCAGTACCG 432
BSNT_01924___ 430 GTTATTATTTGGGGCAGCAAACTCATCCATATTGCACTAGAGAAAATACC 479
.|||||||||||||.||.||.||.||.|||...||..||...|||.|.||
BPUM_1078___y 433 ATTATTATTTGGGGAAGTAAGCTGATTCATGCCGCTTTAACCAAATTCCC 482
BSNT_01924___ 480 GCTTCTGATTTACGCGGGAAGCGGGCTGCTTGCTTATACTGGTGGAGAAA 529
|.||||..|.||||..|||||.|..||..|.||||.||||||.||.||||
BPUM_1078___y 483 GTTTCTTTTATACGGAGGAAGTGCTCTTTTGGCTTTTACTGGCGGTGAAA 532
BSNT_01924___ 530 TGATTGTCAGAGA---CAAAAAGCTGTCTCTT-------TTTATGGCGCA 569
|||||||..|.|| .||| || ||||||||.||
BPUM_1078___y 533 TGATTGTTCGTGATGTGAAA----------TTGAATGAATTTATGGCACA 572
BSNT_01924___ 570 GCACGGCACAGTTGAAACGCTCCTCCCCATTTTGACTGTTGCGT--TTGT 617
|||||..||..|||||..|.|.|||||..||||.||.|| |.| |.||
BPUM_1078___y 573 GCACGCAACTCTTGAATTGATGCTCCCTTTTTTAACAGT--CATCATGGT 620
BSNT_01924___ 618 TATCCTTGCGAGCATTTATTACCAGCA---GGTTGAA---AAATAA 657
.||..|.||.|||.|.|.||||.|.|| ||.|||| ||||||
BPUM_1078___y 621 CATTTTAGCCAGCCTGTTTTACGAACAAACGGCTGAAAACAAATAA 666
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